Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACKZ7V_RS12845 Genome accession   NZ_CP176566
Coordinates   2590012..2591055 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain IMT37083     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2585012..2596055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7V_RS12815 (ACKZ7V_12815) - 2585433..2586689 (-) 1257 WP_078064589.1 aminopeptidase -
  ACKZ7V_RS12820 (ACKZ7V_12820) - 2586692..2586892 (-) 201 WP_000180460.1 DUF1128 family protein -
  ACKZ7V_RS12825 (ACKZ7V_12825) - 2587039..2587503 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  ACKZ7V_RS12830 (ACKZ7V_12830) - 2587510..2587785 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  ACKZ7V_RS12835 (ACKZ7V_12835) - 2588063..2589280 (+) 1218 WP_148843683.1 YihY/virulence factor BrkB family protein -
  ACKZ7V_RS12840 (ACKZ7V_12840) vraR 2589393..2590022 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  ACKZ7V_RS12845 (ACKZ7V_12845) vraS 2590012..2591055 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACKZ7V_RS12850 (ACKZ7V_12850) liaF 2591052..2591753 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACKZ7V_RS12855 (ACKZ7V_12855) - 2591768..2592154 (-) 387 WP_001110179.1 hypothetical protein -
  ACKZ7V_RS12860 (ACKZ7V_12860) map 2592370..2593128 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  ACKZ7V_RS12865 (ACKZ7V_12865) - 2593598..2594584 (+) 987 WP_111762469.1 FUSC family protein -
  ACKZ7V_RS12870 (ACKZ7V_12870) - 2594957..2595370 (-) 414 WP_111762822.1 hypothetical protein -
  ACKZ7V_RS12875 (ACKZ7V_12875) - 2595399..2595509 (-) 111 WP_111762470.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1080960 ACKZ7V_RS12845 WP_001017131.1 2590012..2591055(-) (vraS) [Staphylococcus aureus strain IMT37083]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1080960 ACKZ7V_RS12845 WP_001017131.1 2590012..2591055(-) (vraS) [Staphylococcus aureus strain IMT37083]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAACGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTGGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATT
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment