Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACKZ7S_RS13450 Genome accession   NZ_CP176565
Coordinates   2684204..2684869 (-) Length   221 a.a.
NCBI ID   WP_162635890.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V0353     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2679204..2689869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7S_RS13430 (ACKZ7S_13430) - 2679668..2679781 (-) 114 WP_078315476.1 hypothetical protein -
  ACKZ7S_RS13435 (ACKZ7S_13435) - 2680446..2682446 (-) 2001 WP_063644485.1 ABC transporter permease -
  ACKZ7S_RS13440 (ACKZ7S_13440) - 2682443..2683198 (-) 756 WP_000923770.1 ABC transporter ATP-binding protein -
  ACKZ7S_RS13445 (ACKZ7S_13445) braS 2683306..2684193 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  ACKZ7S_RS13450 (ACKZ7S_13450) braR 2684204..2684869 (-) 666 WP_162635890.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  ACKZ7S_RS13455 (ACKZ7S_13455) - 2684895..2685095 (-) 201 WP_000604725.1 hypothetical protein -
  ACKZ7S_RS13460 (ACKZ7S_13460) - 2685293..2686717 (+) 1425 WP_000948997.1 alkaline phosphatase -
  ACKZ7S_RS13465 (ACKZ7S_13465) - 2686777..2686878 (-) 102 WP_000731972.1 SE2200 family small protein -
  ACKZ7S_RS13470 (ACKZ7S_13470) - 2687000..2687455 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACKZ7S_RS13475 (ACKZ7S_13475) - 2687700..2688461 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25388.46 Da        Isoelectric Point: 4.7961

>NTDB_id=1080923 ACKZ7S_RS13450 WP_162635890.1 2684204..2684869(-) (braR) [Staphylococcus aureus strain V0353]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFSLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1080923 ACKZ7S_RS13450 WP_162635890.1 2684204..2684869(-) (braR) [Staphylococcus aureus strain V0353]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAGCTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment