Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACKZ7T_RS10895 Genome accession   NZ_CP176564
Coordinates   2167864..2168583 (+) Length   239 a.a.
NCBI ID   WP_409481401.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V0641     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2162864..2173583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7T_RS10865 (ACKZ7T_10865) - 2163081..2163707 (+) 627 WP_000522373.1 nitroreductase family protein -
  ACKZ7T_RS10870 (ACKZ7T_10870) - 2164068..2164853 (+) 786 WP_409481400.1 carbon-nitrogen family hydrolase -
  ACKZ7T_RS10875 (ACKZ7T_10875) hld 2165453..2165533 (-) 81 WP_000046022.1 delta-hemolysin -
  ACKZ7T_RS10880 (ACKZ7T_10880) - 2165823..2166386 (+) 564 WP_001105715.1 accessory gene regulator AgrB -
  ACKZ7T_RS10885 (ACKZ7T_10885) agrD 2166388..2166528 (+) 141 WP_001094303.1 cyclic lactone autoinducer peptide AgrD -
  ACKZ7T_RS10890 (ACKZ7T_10890) agrC 2166553..2167845 (+) 1293 WP_001807128.1 quorum-sensing sensor histidine kinase AgrC -
  ACKZ7T_RS10895 (ACKZ7T_10895) agrA 2167864..2168583 (+) 720 WP_409481401.1 quorum-sensing response regulator AgrA Regulator
  ACKZ7T_RS10900 (ACKZ7T_10900) - 2168652..2168759 (+) 108 WP_072491856.1 hypothetical protein -
  ACKZ7T_RS10905 (ACKZ7T_10905) - 2168947..2169906 (-) 960 WP_001253302.1 carbohydrate kinase family protein -
  ACKZ7T_RS10910 (ACKZ7T_10910) - 2169903..2171387 (-) 1485 WP_250414421.1 sucrose-6-phosphate hydrolase -
  ACKZ7T_RS10915 (ACKZ7T_10915) - 2171536..2172486 (-) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28034.07 Da        Isoelectric Point: 6.3009

>NTDB_id=1080879 ACKZ7T_RS10895 WP_409481401.1 2167864..2168583(+) (agrA) [Staphylococcus aureus strain V0641]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKIK

Nucleotide


Download         Length: 720 bp        

>NTDB_id=1080879 ACKZ7T_RS10895 WP_409481401.1 2167864..2168583(+) (agrA) [Staphylococcus aureus strain V0641]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCC
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACACGTATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAACATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATAAAATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-239)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

99.582

0.996

Multiple sequence alignment