Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACAK39_RS07470 Genome accession   NZ_AP029016
Coordinates   1580489..1581115 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain CRE21025     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1575489..1586115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK39_RS07450 (EAG21025_14620) - 1575889..1577649 (-) 1761 WP_023311027.1 Lon protease family protein -
  ACAK39_RS07455 (EAG21025_14630) matP 1577836..1578288 (+) 453 WP_369605114.1 macrodomain Ter protein MatP -
  ACAK39_RS07460 (EAG21025_14640) ompA 1578352..1579407 (-) 1056 WP_115504044.1 porin OmpA -
  ACAK39_RS07465 (EAG21025_14650) sulA 1579762..1580271 (-) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  ACAK39_RS07470 (EAG21025_14660) sxy/tfoX 1580489..1581115 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  ACAK39_RS07475 (EAG21025_14670) yccS 1581072..1583234 (-) 2163 WP_038417559.1 YccS family putative transporter -
  ACAK39_RS07480 (EAG21025_14680) - 1583254..1583700 (-) 447 WP_211138597.1 YccF domain-containing protein -
  ACAK39_RS07485 (EAG21025_14690) helD 1583824..1585878 (+) 2055 WP_338233503.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=108082 ACAK39_RS07470 WP_023311030.1 1580489..1581115(+) (sxy/tfoX) [Enterobacter asburiae strain CRE21025]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=108082 ACAK39_RS07470 WP_023311030.1 1580489..1581115(+) (sxy/tfoX) [Enterobacter asburiae strain CRE21025]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGCGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCATCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACGTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment