Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACK2WG_RS07700 Genome accession   NZ_CP176536
Coordinates   1483918..1484502 (+) Length   194 a.a.
NCBI ID   WP_061187376.1    Uniprot ID   -
Organism   Bacillus spizizenii strain 29-4     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1478918..1489502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2WG_RS07670 (ACK2WG_07670) dapD 1479103..1479813 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACK2WG_RS07675 (ACK2WG_07675) - 1479883..1481007 (+) 1125 WP_061187374.1 N-acetyldiaminopimelate deacetylase -
  ACK2WG_RS07680 (ACK2WG_07680) - 1481069..1481314 (+) 246 WP_003218684.1 YkuS family protein -
  ACK2WG_RS07685 (ACK2WG_07685) mscT 1481350..1482153 (-) 804 WP_014113625.1 small-conductance mechanosensitive channel protein MscT -
  ACK2WG_RS07690 (ACK2WG_07690) ahpA 1482397..1482939 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ACK2WG_RS07695 (ACK2WG_07695) ykuV 1483009..1483467 (+) 459 WP_014113626.1 thiol-disulfide oxidoreductase YkuV -
  ACK2WG_RS07700 (ACK2WG_07700) rok 1483918..1484502 (+) 585 WP_061187376.1 transcriptional regulator Rok Regulator
  ACK2WG_RS07705 (ACK2WG_07705) - 1484543..1485508 (-) 966 WP_014113629.1 hypothetical protein -
  ACK2WG_RS07710 (ACK2WG_07710) - 1485644..1486243 (+) 600 WP_072182655.1 molybdenum cofactor guanylyltransferase -
  ACK2WG_RS07715 (ACK2WG_07715) - 1486294..1487313 (+) 1020 WP_061187379.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACK2WG_RS07720 (ACK2WG_07720) glp 1487331..1488623 (+) 1293 WP_087987148.1 gephyrin-like molybdotransferase Glp -
  ACK2WG_RS07725 (ACK2WG_07725) mobB 1488584..1489117 (+) 534 WP_014113633.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22113.10 Da        Isoelectric Point: 9.7036

>NTDB_id=1080772 ACK2WG_RS07700 WP_061187376.1 1483918..1484502(+) (rok) [Bacillus spizizenii strain 29-4]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESAND

Nucleotide


Download         Length: 585 bp        

>NTDB_id=1080772 ACK2WG_RS07700 WP_061187376.1 1483918..1484502(+) (rok) [Bacillus spizizenii strain 29-4]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTAGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGGACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAATGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGCGAAATTGAATCAGCTGA
ATCTGCAGAATCAGCAAATGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment