Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACK2WG_RS07600 Genome accession   NZ_CP176536
Coordinates   1468067..1468531 (-) Length   154 a.a.
NCBI ID   WP_072566201.1    Uniprot ID   -
Organism   Bacillus spizizenii strain 29-4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1463067..1473531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2WG_RS07580 (ACK2WG_07580) kinA 1463534..1465354 (+) 1821 WP_061187370.1 sporulation histidine kinase KinA -
  ACK2WG_RS07585 (ACK2WG_07585) - 1465364..1466545 (-) 1182 WP_003218653.1 aminotransferase A -
  ACK2WG_RS07590 (ACK2WG_07590) - 1466747..1466908 (-) 162 WP_003218655.1 hypothetical protein -
  ACK2WG_RS07595 (ACK2WG_07595) cheV 1467114..1468025 (+) 912 WP_014113613.1 chemotaxis protein CheV -
  ACK2WG_RS07600 (ACK2WG_07600) kre 1468067..1468531 (-) 465 WP_072566201.1 YkyB family protein Regulator
  ACK2WG_RS07605 (ACK2WG_07605) - 1468657..1469949 (-) 1293 WP_072566202.1 MFS transporter -
  ACK2WG_RS07610 (ACK2WG_07610) - 1470025..1470519 (-) 495 WP_072182876.1 L,D-transpeptidase family protein -
  ACK2WG_RS07615 (ACK2WG_07615) - 1470576..1471436 (-) 861 WP_061187371.1 metallophosphoesterase -
  ACK2WG_RS07620 (ACK2WG_07620) fadH 1471578..1472342 (+) 765 WP_409509664.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17921.74 Da        Isoelectric Point: 10.3121

>NTDB_id=1080771 ACK2WG_RS07600 WP_072566201.1 1468067..1468531(-) (kre) [Bacillus spizizenii strain 29-4]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKYLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1080771 ACK2WG_RS07600 WP_072566201.1 1468067..1468531(-) (kre) [Bacillus spizizenii strain 29-4]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATACCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTTAGCCAACAGCAATCGGACGTGCTTATTTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAATACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAACCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTTTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment