Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACK2WG_RS06120 Genome accession   NZ_CP176536
Coordinates   1198666..1198857 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus spizizenii strain 29-4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1193666..1203857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2WG_RS06090 (ACK2WG_06090) argF 1194527..1195486 (+) 960 WP_079288621.1 ornithine carbamoyltransferase -
  ACK2WG_RS06095 (ACK2WG_06095) - 1195572..1195751 (+) 180 WP_003224549.1 YjzC family protein -
  ACK2WG_RS06100 (ACK2WG_06100) - 1195797..1195982 (-) 186 WP_003224551.1 YjzD family protein -
  ACK2WG_RS06105 (ACK2WG_06105) - 1196232..1196966 (+) 735 WP_332606736.1 hypothetical protein -
  ACK2WG_RS06110 (ACK2WG_06110) - 1197050..1197607 (+) 558 WP_332606737.1 hypothetical protein -
  ACK2WG_RS06115 (ACK2WG_06115) med 1197698..1198651 (+) 954 WP_332606738.1 transcriptional regulator Med Regulator
  ACK2WG_RS06120 (ACK2WG_06120) comZ 1198666..1198857 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACK2WG_RS06125 (ACK2WG_06125) - 1198887..1199114 (-) 228 WP_072183380.1 hypothetical protein -
  ACK2WG_RS06130 (ACK2WG_06130) fabH 1199280..1200218 (+) 939 WP_014113357.1 beta-ketoacyl-ACP synthase III -
  ACK2WG_RS06135 (ACK2WG_06135) fabF 1200243..1201484 (+) 1242 WP_014113358.1 beta-ketoacyl-ACP synthase II -
  ACK2WG_RS06140 (ACK2WG_06140) - 1201560..1202345 (+) 786 WP_332606739.1 DUF2268 domain-containing protein -
  ACK2WG_RS06145 (ACK2WG_06145) appD 1202534..1203520 (+) 987 WP_332606740.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1080763 ACK2WG_RS06120 WP_003224559.1 1198666..1198857(+) (comZ) [Bacillus spizizenii strain 29-4]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1080763 ACK2WG_RS06120 WP_003224559.1 1198666..1198857(+) (comZ) [Bacillus spizizenii strain 29-4]
ATGCAGCACGAAAAATCACTTGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCGATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment