Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACKW6F_RS07060 Genome accession   NZ_CP176527
Coordinates   1412110..1412682 (+) Length   190 a.a.
NCBI ID   WP_025092353.1    Uniprot ID   A0A5C0WCR7
Organism   Bacillus safensis strain D-62     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1407110..1417682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKW6F_RS07030 (ACKW6F_07030) dapD 1407225..1407935 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACKW6F_RS07035 (ACKW6F_07035) - 1408018..1409148 (+) 1131 WP_044331971.1 N-acetyldiaminopimelate deacetylase -
  ACKW6F_RS07040 (ACKW6F_07040) - 1409199..1409441 (+) 243 WP_024424725.1 YkuS family protein -
  ACKW6F_RS07045 (ACKW6F_07045) - 1409464..1410273 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  ACKW6F_RS07050 (ACKW6F_07050) ahpA 1410546..1411088 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  ACKW6F_RS07055 (ACKW6F_07055) - 1411171..1411629 (+) 459 WP_024424727.1 TlpA family protein disulfide reductase -
  ACKW6F_RS07060 (ACKW6F_07060) rok 1412110..1412682 (+) 573 WP_025092353.1 transcriptional regulator Rok Regulator
  ACKW6F_RS07065 (ACKW6F_07065) - 1412730..1413647 (-) 918 WP_034623329.1 hypothetical protein -
  ACKW6F_RS07070 (ACKW6F_07070) - 1413733..1414314 (+) 582 WP_041117250.1 molybdenum cofactor guanylyltransferase -
  ACKW6F_RS07075 (ACKW6F_07075) - 1414345..1415361 (+) 1017 WP_044335906.1 thiazole biosynthesis adenylyltransferase ThiF -
  ACKW6F_RS07080 (ACKW6F_07080) glp 1415371..1416648 (+) 1278 WP_187470533.1 gephyrin-like molybdotransferase Glp -
  ACKW6F_RS07085 (ACKW6F_07085) mobB 1416630..1417154 (+) 525 WP_024424784.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACKW6F_RS07090 (ACKW6F_07090) - 1417151..1417642 (+) 492 WP_024424732.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21547.49 Da        Isoelectric Point: 9.7309

>NTDB_id=1080672 ACKW6F_RS07060 WP_025092353.1 1412110..1412682(+) (rok) [Bacillus safensis strain D-62]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=1080672 ACKW6F_RS07060 WP_025092353.1 1412110..1412682(+) (rok) [Bacillus safensis strain D-62]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAAACACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment