Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACKW6F_RS04215 Genome accession   NZ_CP176527
Coordinates   883421..884212 (+) Length   263 a.a.
NCBI ID   WP_133744899.1    Uniprot ID   -
Organism   Bacillus safensis strain D-62     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 878421..889212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKW6F_RS04180 (ACKW6F_04180) - 878510..879058 (+) 549 WP_024425227.1 thioredoxin family protein -
  ACKW6F_RS04185 (ACKW6F_04185) - 879392..879859 (+) 468 WP_024425226.1 thiol-disulfide oxidoreductase DCC family protein -
  ACKW6F_RS04190 (ACKW6F_04190) - 879896..881152 (-) 1257 WP_024425225.1 transcriptional regulator -
  ACKW6F_RS04195 (ACKW6F_04195) - 881424..882011 (+) 588 WP_044334458.1 nitroreductase -
  ACKW6F_RS04200 (ACKW6F_04200) - 882050..882205 (-) 156 WP_024425223.1 YfhD family protein -
  ACKW6F_RS04205 (ACKW6F_04205) - 882267..882377 (-) 111 WP_017358836.1 YfhE family protein -
  ACKW6F_RS04210 (ACKW6F_04210) - 882430..883326 (-) 897 WP_149125852.1 TIGR01777 family oxidoreductase -
  ACKW6F_RS04215 (ACKW6F_04215) recX 883421..884212 (+) 792 WP_133744899.1 recombination regulator RecX Regulator
  ACKW6F_RS04220 (ACKW6F_04220) - 884216..884530 (+) 315 WP_041106359.1 YfhH family protein -
  ACKW6F_RS04225 (ACKW6F_04225) - 884554..884727 (-) 174 WP_008360604.1 YpzG family protein -
  ACKW6F_RS04230 (ACKW6F_04230) - 884753..884902 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  ACKW6F_RS04235 (ACKW6F_04235) - 885019..885291 (+) 273 WP_024425219.1 YfhJ family protein -
  ACKW6F_RS04240 (ACKW6F_04240) - 885591..886574 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30621.06 Da        Isoelectric Point: 6.6679

>NTDB_id=1080655 ACKW6F_RS04215 WP_133744899.1 883421..884212(+) (recX) [Bacillus safensis strain D-62]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEDEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1080655 ACKW6F_RS04215 WP_133744899.1 883421..884212(+) (recX) [Bacillus safensis strain D-62]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGAAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTATCCCAATACCCTGATGACTTACAGCTCGAGGAA
GCCGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGACGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTAAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

64.773

100

0.65

Multiple sequence alignment