Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   ACJX3V_RS05800 Genome accession   NZ_CP176523
Coordinates   1116721..1117377 (+) Length   218 a.a.
NCBI ID   WP_046559486.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain MEPW12     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111721..1122377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJX3V_RS05775 oppF 1112250..1113167 (+) 918 WP_003155037.1 oligopeptide ABC transporter ATP-binding protein OppF -
  ACJX3V_RS05780 - 1113274..1114461 (+) 1188 WP_003155036.1 putative glycoside hydrolase -
  ACJX3V_RS05785 - 1114579..1115157 (+) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  ACJX3V_RS05790 spx 1115336..1115731 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  ACJX3V_RS05795 - 1115789..1116445 (-) 657 WP_003155033.1 TerC family protein -
  ACJX3V_RS05800 mecA 1116721..1117377 (+) 657 WP_046559486.1 adaptor protein MecA Regulator
  ACJX3V_RS05805 - 1117528..1118688 (+) 1161 WP_046559487.1 competence protein CoiA family protein -
  ACJX3V_RS05810 pepF 1118916..1120745 (+) 1830 WP_088005489.1 oligoendopeptidase F Regulator
  ACJX3V_RS05815 - 1120783..1120950 (-) 168 WP_003155026.1 hypothetical protein -
  ACJX3V_RS05820 spxH 1121236..1122138 (-) 903 WP_024085126.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25990.79 Da        Isoelectric Point: 4.1143

>NTDB_id=1080598 ACJX3V_RS05800 WP_046559486.1 1116721..1117377(+) (mecA) [Bacillus amyloliquefaciens strain MEPW12]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFPS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=1080598 ACJX3V_RS05800 WP_046559486.1 1116721..1117377(+) (mecA) [Bacillus amyloliquefaciens strain MEPW12]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTCCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

88.991

100

0.89

Multiple sequence alignment