Detailed information NTG1080262

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACJ3Y0_RS11625
• Genome accession: NZ_CP176471
• Coordinates: 2522923..2526312 (-)
• Length: 1129 a.a.
• NCBI ID: WP_372383849.1
• Uniprot ID: -
• Organism: Vibrio sp. BS-M-Sm-2
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2517923..2531312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ3Y0_RS11610 (ACJ3Y0_11610)	-	2518357..2519382 (-)	1026	WP_060982641.1	ABC transporter permease	-
ACJ3Y0_RS11615 (ACJ3Y0_11615)	-	2519385..2520371 (-)	987	WP_017633262.1	ABC transporter permease	-
ACJ3Y0_RS11620 (ACJ3Y0_11620)	-	2520541..2522223 (-)	1683	WP_060982640.1	ABC transporter substrate-binding protein	-
ACJ3Y0_RS11625 (ACJ3Y0_11625)	chiS	2522923..2526312 (-)	3390	WP_372383849.1	response regulator	Regulator
ACJ3Y0_RS11630 (ACJ3Y0_11630)	rsmC	2526529..2527551 (-)	1023	WP_372383850.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACJ3Y0_RS11635 (ACJ3Y0_11635)	-	2527662..2528747 (-)	1086	WP_285954254.1	AI-2E family transporter	-
ACJ3Y0_RS11640 (ACJ3Y0_11640)	hemL	2529090..2530385 (-)	1296	WP_146490649.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACJ3Y0_RS11645 (ACJ3Y0_11645)	erpA	2530682..2531023 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127152.87 Da
• Isoelectric Point: 5.3636

>NTDB_id=1080262 ACJ3Y0_RS11625 WP_372383849.1 2522923..2526312(-) (chiS) [Vibrio sp. BS-M-Sm-2]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAMFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKNDDYGTNLLTGKYKDSNLGITFQRLAKDVTDRRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTLNQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVVVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMLLIKSQNDELEDNLKTIKKQNEDLQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDAS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQDELDSYNESGHYSHFQAPDLIDNSQQENSVISENP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDAMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=1080262 ACJ3Y0_RS11625 WP_372383849.1 2522923..2526312(-) (chiS) [Vibrio sp. BS-M-Sm-2]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATGTTTTTCCTCCAATCGCACAGTCAGGATCTCCAGGAACAAAGCACCTCACACCTTGTTT
CGGTTCGTGATACTAAGCAGCAGCAAATTGTCGATTACCTACAAGCCCAAGAATCCCAAGTGATGGGCTTTGTTCGCTCA
GAATTGGCCAATGCCAGTGGCGGGCGATTTTATGGTTTAATCAATGCTTTCCAACGATTGGGGTTAGATATTGACGAGGC
ACGCAGTAATGCGCAGCAACGCTACATTCAGGGATCTGGCGATCAAATCAAAACGTCGATTCTTCCAGAGTCCAGTAGCT
TTATTGGCAGCGAGCGTTATCGACTACTTCACAAGCGCTACCATAATGCTTACCTAGAGCTGCTTAAACGCTCTGATTTT
GACGATATTCTCTTGGTTGATATCAACGGTAACGTCGCTTATTCCGTCTTTAAAAATGATGATTACGGCACCAACCTGCT
GACTGGAAAATACAAGGACTCCAACCTAGGTATTACCTTTCAACGACTAGCGAAAGACGTAACCGACCGACGCAAATCTA
ACGAAGATTACACGCCGGTTATCGTTTCTGACTTTAAAGACGAGAACGGCAAGCAGACCGCATGGCTAGGCGCACCTATC
GTTCAACAGGGCTACCTACACAGTTACGCGATGTTTAGATTGCCAATCAACGGCATTACTAAGCTGATTGCGGATCTCAA
CAAGAGTTCGAATATTCAAACACTACTTGTGGGTGATGATCACCTGCCGCGTAGCCTTGCTCATTCACAAGAATCTATCA
ACTTAAGCTTAGATGTTGTCGATAAAGCATTGGCTGGCGAAACAGCGGTTGGCACCTTCGACAACACCCTGAATCAAGCG
ATCATCGCAGCCTATACACCAATTGAACTCAAGTACGCGACTTGGGCTCTTGTTGTCGAGCTTCCGGAGAAAGAGGCATT
TGCCCGTATTCATCAGTTAGAAAAGATCTTCGTGATAGTGATGTTAACCGCGATCATTCTGGTTGTTGTCGCATCGCACT
ATCTGTCTAACTTCATCACCTCACCGCTACTTAAACTGACGTGGGCAGCCGAGAAAGTTTCTGCGGGTGATCTTGATGAG
ACGATGATCAATACCGAACGTAAAGATGAAATCGGTCGTTTGGCGGTAAGCTTTGAACGAATGCAGCGCTCCATTCGTGA
AAAGATGCTGCTTATCAAAAGCCAAAATGATGAGCTTGAAGACAACCTCAAGACCATTAAAAAGCAAAACGAAGATTTGC
AGCTGGCTAACAAACTCAAAGATGAGTTCTTAGCAACCACCTCTCACGAATTGAGAACACCACTGCATGGCATGGTGGGC
ATTGCTGAAGCGTTGATATCTGGAGCGAATGGTCCTATTCCTGCTAATCAGAAGTATCAGTTGGATATCATCATCAATAG
TGGTCAGAGATTGGCGACCTTGGTTGATGATCTGCTTGATTATCACAAGATGCGCTATGGCAGCTTGGACATTAAGAAGT
CAGCCGTTGATTTGTCTGCAGCCACCAGCTTGGTCCTAGAGTTGTCTCATCACCTGTTGGGCAATAAGCCAATCCGTATT
ATTAACCAAGTGCCAAGTGATTTAGGGCTGGTTTCATCGGATCCTCAACGACTTGAGCAAGTAATGTATAACTTGGTCGG
CAATGCCATCAAGTACACCTCAGAAGGTAAAATTGTTATCTCTGCCAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TCGATACTGGCCAAGGTATTCCAGCCGAGTATCTTGAACACATCTTTGAGCCATTGATTCAAGCAGGACAAGATGCGAGT
AACTACCGCCAAGGTGCTGGGCTTGGATTATCGATCAGTCGTCAGTTAATTGAGTTAATGGGCGGTTCGCTGTACGTAAG
TAGCCAGCCAATGCTTGGCACTACGTTTAGCTTTACCCTGCCCCTAGCTACTCAAGATGAGCTGGACAGTTACAACGAAT
CAGGTCACTACTCGCACTTCCAAGCACCTGATTTAATTGATAACAGCCAACAAGAAAACAGTGTTATCAGTGAAAACCCA
GATGGTCCGTTACTGGTTATCGCCGATGATGAGCCGGTTAACCTGCGAGTATTAGACAGCTTCTTGAAGTTAGAAGGTTA
TCGAGTACGTACTGCATGTGACGGCCCTGAAACCATCGAGTTAATTGAAAAAGAGAAACCGGAACTACTGCTGCTCGATA
TAATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTGCGTAAGCAATACGATCATGCTCAATTGCCAATCATC
ATGCTAACGGCACTCAACCAAGCAGAAGACCGTGTTCGAGGTTTCGAAGCGGGTGCCAATGACTACTTATCGAAGCCATT
CAACAAACAAGAACTGGCGGCTCGAATAACAGCGCATCTATCAGCAAGTAAAGCCGAACAGAGGCGCCTTGAAAACGACC
AACTGCAACTCGAGCTCAAACATAGAGCGATGGTTGAGGCTAACCTGTTGGAAACTCAAGGACGCTTATTAGAACAGTTA
GAATCGGCACCTGAGGCTATCATCTGTATTCGTGATGACCAACGTATTCGCTTTGCTAACGAAGCGGCAGCGAAGCTATT
CAGGCGCGGTCAAGAACAACTTAAACGCTCAATGGCTGACGAGATCATCGCACCTAAATACCTTAAGGTGGAACAAGCAC
ACTACTGCGGTGACATTGATATCTATATAGATGACACACGTCAGCGCATACCAAGTGACATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTTAATGTAGGCGGTGGCGTTAACTCAAACCGTATTAATAACCTTGAGACCGCTGT
TGAAGCGCTTTCTAGCTATGCATTTGAAGGTGATAAGGACAAACTGCAACAATTGAAAGAACTCGGTGGTGAGTTTACTC
GTCTTGCAGATAAAGCCACTGGAGAAGGTAAAAACAAGCAAGAGTTAATGCGTGAGGTCTTAGTCGATGCGATGACTAAT
GCCATTATCTACTGGGAATCGGTGACTGGTGAAACCAAATTTGCTTTCGCCGAGAAGAGTGGCTTGTGGCGTGTCTACTT
AGATCGCAGTACGTTGCAAACTCGAACGCTAGACAAATACCTACGCGTCGAAACCTTACCAAAAACACCTCGCTGGCGAA
CGGTATTGAGTTCTATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAGAGGACGCATATTGAGATGCTAAGG
GATAAACTGCAGAAACTCTTGACCAGTTAA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (880-914)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.765