Detailed information NTG1080244

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACJ3Y0_RS09910
• Genome accession: NZ_CP176471
• Coordinates: 2189541..2190545 (-)
• Length: 334 a.a.
• NCBI ID: WP_048659182.1
• Uniprot ID: -
• Organism: Vibrio sp. BS-M-Sm-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2184541..2195545

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ3Y0_RS09880 (ACJ3Y0_09880)	zapB	2184707..2184949 (+)	243	WP_008219652.1	cell division protein ZapB	-
ACJ3Y0_RS09885 (ACJ3Y0_09885)	rraA	2185043..2185561 (-)	519	WP_017061152.1	ribonuclease E activity regulator RraA	-
ACJ3Y0_RS09890 (ACJ3Y0_09890)	-	2185635..2186552 (-)	918	WP_210446820.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACJ3Y0_RS09895 (ACJ3Y0_09895)	hslU	2186708..2188048 (-)	1341	WP_048605412.1	HslU--HslV peptidase ATPase subunit	-
ACJ3Y0_RS09900 (ACJ3Y0_09900)	hslV	2188107..2188655 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
ACJ3Y0_RS09905 (ACJ3Y0_09905)	ftsN	2188879..2189418 (-)	540	WP_327785129.1	cell division protein FtsN	-
ACJ3Y0_RS09910 (ACJ3Y0_09910)	cytR	2189541..2190545 (-)	1005	WP_048659182.1	DNA-binding transcriptional regulator CytR	Regulator
ACJ3Y0_RS09915 (ACJ3Y0_09915)	priA	2190786..2192987 (-)	2202	WP_210446818.1	primosomal protein N'	-
ACJ3Y0_RS09920 (ACJ3Y0_09920)	rpmE	2193319..2193537 (+)	219	WP_076656772.1	50S ribosomal protein L31	-
ACJ3Y0_RS09925 (ACJ3Y0_09925)	-	2193870..2195177 (+)	1308	WP_146492423.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36531.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1080244 ACJ3Y0_RS09910 WP_048659182.1 2189541..2190545(-) (cytR) [Vibrio sp. BS-M-Sm-2]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVETAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKSEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPVSATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRM

Nucleotide

• Length: 1005 bp

>NTDB_id=1080244 ACJ3Y0_RS09910 WP_048659182.1 2189541..2190545(-) (cytR) [Vibrio sp. BS-M-Sm-2]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCCACAGTATCACGTGCATTGATGAACCCTGAGAA
AGTCTCAGTTTCAACTCGTAAACGAGTGGAAACAGCAGTACTTGAAGCTGGATACTCACCCAATACATTAGCTCGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACAATCGTTCCTGATATCTGTGACCCTTATTTCGCCGAGATCATTCGTGGT
ATCGAAGATGCCGCAGTAGAAAATGACTACCTTGTCTTACTGGGTGATAGCGGCCAACAAAAGAAGCGTGAGTCTTCGTT
TGTTAACTTAGTTTTCACCAAACAAGCTGACGGCATGCTGTTACTTGGCACTGACCATCCATTTGATGTCAGTAAGTCTG
AACAAAAGAACTTACCACCAATGGTGATGGCGTGTGAGTTTGCCCCTGAGCTTGAACTTCCTACCGTACACATCGATAAC
CTGACCTCGGCATTTGAAGCGGTTAACTACCTAGCTCAGTTAGGTCATAAACGTATTGCTCAAATCTCAGGCCCAGTATC
AGCAACACTTTGTAAGTTCCGTCAACAAGGCTACCAACAAGCGCTACGCCGTGCTGGAGTCTCAATGAATCCAGCCTACA
GTACCGTCGGTGATTTTACCTTTGAAGCGGGTGCTCAAGCAGTTCGTCAATTGCTAGCACTACCTGAGCAACCAACCGCT
ATCTTCTGTCACAACGATGCGATGGCCATTGGCGCTATTCAAGAAGCGAAGAAGCTAGGCTTACGCGTTCCTCAAGACCT
ATCGATTGTCGGCTTCGATGACATCCAATTTGCTCAATACTGCGATCCACCGCTCACCACCATCTCTCAACCTCGTTATG
AGATTGGACGCCAAGCGATGTTGATGATGCTTGATCTACTGAAAGGCAACGATGTGCAAGCAGGTTCGCGTCTACTTGAA
GCTAAATTAGTGGTTCGAGGCAGTACAGCACCACCTCGAATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.458	99.401	0.889
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.701	0.871