Detailed information NTG1080145

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: UPTC5044_RS01580
• Genome accession: NZ_CP176434
• Coordinates: 283115..284293 (+)
• Length: 392 a.a.
• NCBI ID: WP_257929077.1
• Uniprot ID: -
• Organism: Campylobacter lari strain 3439-36
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 278115..289293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC5044_RS01560 (UPTC5044_0305)	-	278559..279164 (+)	606	WP_257929081.1	D-sedoheptulose 7-phosphate isomerase	-
UPTC5044_RS01565 (UPTC5044_0306)	-	279152..279823 (+)	672	WP_257929080.1	nucleotidyltransferase family protein	-
UPTC5044_RS01570 (UPTC5044_0307)	-	279820..281088 (+)	1269	WP_257929079.1	nucleotide sugar dehydrogenase	-
UPTC5044_RS01575 (UPTC5044_0308)	-	281091..283118 (+)	2028	WP_257929078.1	capsular polysaccharide biosynthesis protein	-
UPTC5044_RS01580 (UPTC5044_0309)	kpsS	283115..284293 (+)	1179	WP_257929077.1	capsule biosynthesis protein	Regulator
UPTC5044_RS01585 (UPTC5044_0310)	-	284290..285798 (-)	1509	WP_410689912.1	hypothetical protein	-
UPTC5044_RS01590 (UPTC5044_0311)	-	285960..287090 (+)	1131	WP_257928659.1	DUF829 domain-containing protein	-
UPTC5044_RS01595 (UPTC5044_0312)	-	287100..288473 (+)	1374	WP_257928658.1	cytochrome P450	-
UPTC5044_RS01600 (UPTC5044_0313)	-	288470..288823 (+)	354	WP_039625388.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46328.81 Da
• Isoelectric Point: 10.1676

>NTDB_id=1080145 UPTC5044_RS01580 WP_257929077.1 283115..284293(+) (kpsS) [Campylobacter lari strain 3439-36]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPKAKVYKVNFNGGDFFFYPFKSINYTKSLADLEDFYKKLFEEKQIQV
IIMYNDCRKVHEVAINVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLRYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVTGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1080145 UPTC5044_RS01580 WP_257929077.1 283115..284293(+) (kpsS) [Campylobacter lari strain 3439-36]
ATGAATTTAAGTAAAAAGTTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGGCCTGTGGGAGGATTTTTTCG
TAAAATTGCTACAAAAATTCCAAAAGCTAAGGTTTATAAAGTAAATTTTAATGGTGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAATTACACTAAAAGTTTAGCTGATCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
ATCATTATGTATAATGATTGTAGAAAAGTTCATGAAGTAGCTATTAATGTTGCTAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTAAATGCAAACTCCACTTTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGCACTTTTAAAAATATG
GCCTTTGCTTCATTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACATCATAGAAGTTT
AAAACTATTTGACTTTTTACCTTGGCTTTGCTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAACG
AAAAAATTCTTTCCCTAAAGCAAAAGTATTTTTTGGCTATTTTACAAGTGCATAATGATACTCAACTCTCCCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCATACCTAGTTTT
TAAACACCATCCTATGGACCGTGGCTATAGGGACTATACCAAACTTATAGAAGATTTGAGTTTAAGATACAATGTCGAGG
GCAGAATTTTATATGTACATGACTTACACTTACCTACACTCTTAATCAATGCAAGAGGCACTATAGTGATAAATAGCACA
GTAGGGCTTTCTGCTTTATATCACAATAGCCCTTTAAAAGTTACGGGAAAAGCCTTTTATGATATTGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGGGCATATAAGCCTGATGCGGTTTTGCATGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGGAATTTTTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.278	100	0.628