Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACKWPP_RS09975 Genome accession   NZ_CP176418
Coordinates   1966121..1966855 (-) Length   244 a.a.
NCBI ID   WP_002942356.1    Uniprot ID   G7SIC8
Organism   Streptococcus suis strain KKAHC02     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1961121..1971855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS09945 (ACKWPP_09945) rnpM 1961349..1961645 (-) 297 WP_024389460.1 RNase P modulator RnpM -
  ACKWPP_RS09950 (ACKWPP_09950) nusA 1961662..1962804 (-) 1143 WP_004194726.1 transcription termination factor NusA -
  ACKWPP_RS09955 (ACKWPP_09955) rimP 1962877..1963347 (-) 471 WP_079396220.1 ribosome maturation factor RimP -
  ACKWPP_RS09960 (ACKWPP_09960) trmB 1963605..1964243 (-) 639 WP_409373898.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACKWPP_RS09965 (ACKWPP_09965) ccrZ 1964240..1965034 (-) 795 WP_002942360.1 cell cycle regulator CcrZ -
  ACKWPP_RS09970 (ACKWPP_09970) - 1965084..1966124 (-) 1041 WP_024411653.1 ABC transporter permease -
  ACKWPP_RS09975 (ACKWPP_09975) pptA 1966121..1966855 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  ACKWPP_RS09980 (ACKWPP_09980) - 1966918..1967331 (+) 414 WP_024385169.1 HIT family protein -
  ACKWPP_RS09985 (ACKWPP_09985) - 1967333..1967635 (+) 303 WP_024395377.1 hypothetical protein -
  ACKWPP_RS09990 (ACKWPP_09990) - 1967745..1968938 (-) 1194 WP_409373899.1 LCP family protein -
  ACKWPP_RS09995 (ACKWPP_09995) - 1968935..1969462 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  ACKWPP_RS10000 (ACKWPP_10000) tsaE 1969455..1969895 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACKWPP_RS10005 (ACKWPP_10005) - 1969997..1971661 (-) 1665 WP_044673929.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26832.10 Da        Isoelectric Point: 4.3606

>NTDB_id=1080082 ACKWPP_RS09975 WP_002942356.1 1966121..1966855(-) (pptA) [Streptococcus suis strain KKAHC02]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1080082 ACKWPP_RS09975 WP_002942356.1 1966121..1966855(-) (pptA) [Streptococcus suis strain KKAHC02]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACTGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACAACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTGCAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCCGTGGCTATCTCTGATTTAATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTTCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SIC8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721

Multiple sequence alignment