Detailed information NTG0108008

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AACI72_RS12675
• Genome accession: NZ_AP029008
• Coordinates: 2718561..2721104 (-)
• Length: 847 a.a.
• NCBI ID: WP_118887995.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain MAFF 211521
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2713561..2726104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACI72_RS12655 (MAFF211521_24920)	-	2714067..2714981 (-)	915	WP_028852903.1	peptidase	-
AACI72_RS12660 (MAFF211521_24930)	-	2715065..2715901 (-)	837	WP_016725806.1	transglutaminase family protein	-
AACI72_RS12665 (MAFF211521_24940)	-	2715959..2716909 (-)	951	WP_011001072.1	alpha-E domain-containing protein	-
AACI72_RS12670 (MAFF211521_24950)	-	2716972..2718453 (-)	1482	WP_167862923.1	circularly permuted type 2 ATP-grasp protein	-
AACI72_RS12675 (MAFF211521_24960)	comA	2718561..2721104 (-)	2544	WP_118887995.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AACI72_RS12680 (MAFF211521_24970)	-	2721114..2721929 (-)	816	WP_071015028.1	TatD family hydrolase	-
AACI72_RS12685 (MAFF211521_24980)	lolD	2721958..2722692 (-)	735	WP_011001068.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AACI72_RS12690 (MAFF211521_24990)	-	2722685..2723935 (-)	1251	WP_011001067.1	lipoprotein-releasing ABC transporter permease subunit	-
AACI72_RS12695 (MAFF211521_25000)	-	2724008..2725087 (+)	1080	WP_020831663.1	Regulatory protein, RpfE type	-

Sequence

Protein

• Length: 847 a.a.
• Molecular weight: 90773.61 Da
• Isoelectric Point: 10.4979

>NTDB_id=108008 AACI72_RS12675 WP_118887995.1 2718561..2721104(-) (comA) [Ralstonia pseudosolanacearum strain MAFF 211521]
MRALLIGFVAGCMALQTRPALAPVWQPALLGLACLLAMALLRRGARLPRLVPVMAALVAACAGFGWSDWRAQQRLSVVLA
PAWEGKDIRATGVVAELPEVTEDATRFLFRIESSDAGDAVPPRVRLSWYGLRSWHERQREAEAATDRRAGIPDLQPGQRW
QLTLRLKRPHSLMNPGGFDGECAMLADDVRAAGYVYTGKRARNALMGEADAGSGVGLRVERWRAAVRRHLLAALPEARYA
PVIVALVVGDQSGIAQADWERFRRTGISHLVSISGLHITMIAGLFGALWMALWRRSFGLARWLRTPLPLRMPAQRAGAVA
AMAAAFAYCLLAGMGVPAQRTLLMLATVAVARLADRSVPVSLSLCWAAALVALVDPWAVMSAGGWLSFGAVAVIFLAARI
VAADARDDGRRPAWPVRAWRGLRGAARVQLAVTFGLLPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALMGTALPEPW
SQPLLIWAEASFAWLMPWLDALALPGGSVWVAPAAPAWAWGLAVVGVPLLLVPGGYRAWAWRAQGAVLLLPMLLARAPAP
PPGEFRMVAFDIGQGAATLVETAGHRLLFDTGPRQGDLADAADRVIVPYLRGHGVQAIDTLVVSHEDSDHAGGTETVMAG
VPVRTMLASLPPGHRLERQARALGIEPAGCVAGQRWAWDGVAFEILYPVQVPSDRAAVSSNARSCVLRIANARYAAMLAG
DIGRAQEAALIAAEAPERLMADILLVPHHGSRTSSSGAFLDAVSPQVAVFQVGYRNRYGHPHPQVWQRYGARGIERLRTD
ATGAVVIETRGDALAVRTARSMRPRYWSSALEVAALAETTEPTGAQP

Nucleotide

• Length: 2544 bp

>NTDB_id=108008 AACI72_RS12675 WP_118887995.1 2718561..2721104(-) (comA) [Ralstonia pseudosolanacearum strain MAFF 211521]
ATGCGCGCCCTGCTGATCGGCTTCGTCGCGGGGTGCATGGCGCTGCAGACGCGGCCGGCGCTGGCGCCGGTGTGGCAGCC
GGCGCTGCTTGGGCTCGCTTGCCTGCTGGCGATGGCGTTGCTGCGGCGCGGCGCTCGGTTGCCCAGGCTCGTTCCCGTGA
TGGCCGCGCTGGTGGCGGCCTGCGCCGGCTTCGGCTGGAGCGATTGGCGCGCGCAGCAGCGCTTGTCCGTGGTGCTGGCG
CCCGCATGGGAGGGCAAGGACATCCGCGCGACGGGCGTCGTGGCCGAGCTGCCCGAGGTCACCGAGGACGCCACGCGTTT
CCTGTTCCGGATTGAATCCAGCGACGCGGGCGATGCCGTACCGCCGCGCGTGCGGCTGTCGTGGTACGGCCTGCGCAGCT
GGCACGAGCGGCAGCGGGAGGCGGAGGCCGCCACCGATCGCCGCGCCGGCATTCCCGATCTGCAGCCCGGCCAGCGCTGG
CAGCTGACGCTGCGGCTCAAGCGGCCGCACAGCCTGATGAATCCCGGCGGCTTCGATGGCGAATGCGCGATGCTTGCCGA
CGATGTCCGTGCCGCGGGCTACGTGTACACGGGCAAACGCGCGCGCAATGCGTTGATGGGCGAAGCCGATGCCGGTTCCG
GTGTTGGGCTCCGTGTCGAGCGCTGGCGCGCCGCGGTGCGGCGGCACCTCCTGGCTGCGCTGCCCGAGGCACGCTACGCG
CCGGTGATCGTCGCGCTGGTGGTGGGCGACCAGAGCGGCATCGCGCAGGCGGATTGGGAGCGCTTCCGCCGCACCGGCAT
CAGCCATCTCGTCAGCATTTCCGGTCTGCACATCACGATGATCGCCGGGCTGTTCGGCGCACTGTGGATGGCGCTGTGGC
GGCGCTCGTTCGGCCTGGCCCGCTGGCTGCGCACACCGCTGCCGCTGCGCATGCCGGCCCAGCGTGCGGGCGCCGTCGCC
GCCATGGCGGCGGCGTTTGCCTATTGCCTGCTGGCGGGGATGGGCGTGCCGGCGCAGCGCACGCTGCTGATGCTCGCGAC
CGTTGCCGTGGCGCGGCTGGCCGATCGCAGCGTGCCGGTCAGCCTGTCGCTGTGCTGGGCGGCGGCCTTGGTGGCGCTGG
TGGACCCGTGGGCGGTCATGTCGGCGGGAGGCTGGCTATCGTTCGGCGCCGTGGCGGTCATCTTCCTGGCCGCGCGGATC
GTTGCCGCCGATGCGCGGGACGACGGCCGCCGGCCCGCCTGGCCGGTGCGCGCCTGGCGCGGCCTGCGCGGCGCCGCGCG
CGTCCAGCTGGCCGTGACGTTCGGCCTGCTGCCGTTGACCTTGCTGCTGTTCCAGCAGGTCTCGGTGGTGTCGGCCGTGG
CCAACGCGCTGGCGATCCCGGTGGTCAGCTTTGTCACGACGCCGCTGGCGCTGATGGGCACGGCGTTGCCCGAGCCATGG
TCGCAGCCGCTGCTGATATGGGCCGAGGCCAGCTTCGCCTGGCTCATGCCGTGGCTGGATGCGCTGGCGCTGCCCGGCGG
GTCGGTGTGGGTGGCGCCCGCCGCGCCGGCCTGGGCCTGGGGGCTGGCGGTGGTCGGTGTGCCGTTGCTGCTCGTGCCGG
GTGGGTACCGCGCCTGGGCCTGGCGGGCGCAGGGCGCGGTGCTGCTGCTGCCGATGCTGCTGGCACGCGCACCGGCGCCG
CCGCCGGGCGAGTTCCGCATGGTCGCATTCGACATCGGCCAGGGCGCCGCCACGCTGGTCGAGACGGCCGGCCACCGGCT
GCTGTTCGATACCGGTCCCCGCCAAGGCGACCTGGCCGATGCCGCCGATCGCGTGATCGTCCCGTATCTGCGCGGACATG
GGGTGCAGGCCATCGACACGCTGGTGGTCAGCCATGAGGATAGCGATCACGCCGGCGGCACCGAAACGGTGATGGCCGGT
GTGCCGGTGCGCACCATGCTGGCGTCCCTGCCGCCCGGCCACCGGCTGGAGCGGCAGGCCCGCGCGCTCGGCATCGAGCC
CGCCGGCTGCGTGGCCGGGCAGCGCTGGGCATGGGACGGCGTCGCCTTCGAAATCCTGTATCCGGTGCAGGTGCCCTCCG
ATCGGGCGGCCGTGTCCAGCAATGCCCGCAGCTGTGTGCTGCGCATCGCCAACGCGCGGTACGCCGCCATGTTGGCCGGC
GACATCGGCCGCGCCCAGGAAGCGGCGCTGATTGCCGCCGAAGCGCCGGAGCGGCTCATGGCAGATATCTTGCTTGTGCC
CCATCACGGCAGCAGGACGAGCTCCAGCGGCGCGTTCCTGGACGCGGTCTCGCCGCAGGTGGCGGTGTTCCAGGTCGGCT
ACCGCAACCGGTACGGTCATCCGCATCCGCAGGTCTGGCAGCGCTACGGCGCGCGCGGCATCGAGCGGCTGCGCACCGAT
GCCACCGGGGCCGTCGTCATCGAGACGCGCGGCGATGCGCTGGCGGTGCGGACGGCGCGGTCGATGCGGCCGCGCTACTG
GTCCTCGGCGCTGGAGGTGGCCGCCCTGGCAGAGACCACGGAGCCCACGGGCGCGCAGCCGTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (246-532)

• Domain of unknown function (DUF4131) (DUF4131) (24-197)

• Beta-lactamase superfamily domain (Lactamase_B_2) (585-745)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Ralstonia pseudosolanacearum GMI1000	99.174	100	0.992