Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACKWPP_RS01185 Genome accession   NZ_CP176418
Coordinates   209611..210324 (+) Length   237 a.a.
NCBI ID   WP_012774930.1    Uniprot ID   A0A142UPI2
Organism   Streptococcus suis strain KKAHC02     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 204611..215324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS01170 (ACKWPP_01170) - 205025..205453 (+) 429 WP_409374376.1 transposase -
  ACKWPP_RS01175 (ACKWPP_01175) treC 205676..207301 (-) 1626 WP_409374033.1 alpha,alpha-phosphotrehalase -
  ACKWPP_RS01180 (ACKWPP_01180) treP 207382..209376 (-) 1995 WP_409374034.1 PTS system trehalose-specific EIIBC component -
  ACKWPP_RS01185 (ACKWPP_01185) treR 209611..210324 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  ACKWPP_RS01190 (ACKWPP_01190) - 210382..210693 (+) 312 WP_029180113.1 hypothetical protein -
  ACKWPP_RS01195 (ACKWPP_01195) - 210690..211238 (+) 549 WP_409374035.1 CvpA family protein -
  ACKWPP_RS01200 (ACKWPP_01200) - 211733..214066 (+) 2334 WP_409374036.1 endonuclease MutS2 -
  ACKWPP_RS01205 (ACKWPP_01205) - 214090..214743 (+) 654 WP_044673712.1 GNAT family N-acetyltransferase -
  ACKWPP_RS01210 (ACKWPP_01210) - 214848..215225 (+) 378 WP_029749883.1 MerR family transcriptional regulator -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27200.07 Da        Isoelectric Point: 6.7422

>NTDB_id=1080053 ACKWPP_RS01185 WP_012774930.1 209611..210324(+) (treR) [Streptococcus suis strain KKAHC02]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=1080053 ACKWPP_RS01185 WP_012774930.1 209611..210324(+) (treR) [Streptococcus suis strain KKAHC02]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAACAGCTCCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTAGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTGACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCATTTGACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCGATTGACGGTAAGG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTCGTGCCAGAGTTGACAACAGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAATCGAGAAGA
GCGTGAGCTAATGCAATCGAAGGATGATTATTTGGTCTTGATTAAATCTCGTGTCTATCTCGGTGATACCCAGCAATTCC
AATATACAGAAAGCAAGCATAAAATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A142UPI2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.137

98.734

0.515

Multiple sequence alignment