Detailed information NTG1080014

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACKVEV_RS09485
• Genome accession: NZ_CP176417
• Coordinates: 1826530..1828971 (-)
• Length: 813 a.a.
• NCBI ID: WP_409370137.1
• Uniprot ID: -
• Organism: Lysinibacillus sp. 38-6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1821530..1833971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKVEV_RS09475	hpaB	1822967..1824406 (-)	1440	WP_409370135.1	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	-
ACKVEV_RS09480	-	1824803..1826497 (-)	1695	WP_409370136.1	polysaccharide deacetylase family protein	-
ACKVEV_RS09485	recD2	1826530..1828971 (-)	2442	WP_409370137.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACKVEV_RS09490	hisA	1829163..1829930 (+)	768	WP_409370138.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
ACKVEV_RS09495	-	1829927..1830214 (+)	288	WP_409370139.1	hypothetical protein	-
ACKVEV_RS09500	-	1830419..1831159 (+)	741	WP_409370140.1	GTP pyrophosphokinase family protein	-
ACKVEV_RS09505	-	1831437..1832096 (-)	660	WP_409370141.1	tetratricopeptide repeat protein	-
ACKVEV_RS09510	mnmA	1832176..1833300 (-)	1125	WP_409370142.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 813 a.a.
• Molecular weight: 91199.44 Da
• Isoelectric Point: 4.9449

>NTDB_id=1080014 ACKVEV_RS09485 WP_409370137.1 1826530..1828971(-) (recD2) [Lysinibacillus sp. 38-6]
MTENLNLFELNKLFILGRPIVSIFHNSQNMYSIVRVKIQETNLQYDDKEIIVVGYFPQLQMDEQYRFTGIMRQHPKYGVQ
FQVETFTKEVPATEQGIVHYLSSDLFVGIGKKTAETIVEKLGANAIRRILEDPNVLDAVPRLSAEKKEVIHRTIEQNLGL
ERVMIQLNEWGFGPQLGMKIYQTYRTETIDFLTENPYRLIEDVDGVGFFRADELGAKLGITGNHPDRIKAAILHILNTAA
LSDGHVFLDAEHVLPQVKGMLEQSQRQEIPYEAISKACIEMREENKIYGEETRLYLPSLYFSEIGIASKIIALTERNSQA
KHFSKDEIRKAIGDTEAFLNVTYAETQANAIEQALNSAVMILTGGPGTGKTTVVRGIVEVYAKLHGLSLNPKEYAQKEEP
FPIILCAPTGRAAKRLAESTELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQIPTVELTDVYRQAEGSTIIELAHQIKRGTIPQDLTMKTSDRSFIKASSDQVANVVTQ
VVKSAVTKGQEIRNIQVLAPMYKGPAGIDNLNKMIQDLVNPNDTGSRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMG
EVISIIKAKETIDKQDLLVVSFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLANGLQRTDDLQRFTSLRARLNPMEAVNEVVEVEVIDEETKEVEGQQEASTAVLQLTVETVPTIHPMI
GMEGISPYDFMDE

Nucleotide

• Length: 2442 bp

>NTDB_id=1080014 ACKVEV_RS09485 WP_409370137.1 1826530..1828971(-) (recD2) [Lysinibacillus sp. 38-6]
ATGACTGAAAATCTGAATTTATTTGAGCTGAATAAGCTTTTTATTCTCGGACGTCCTATTGTCTCCATTTTCCACAATTC
GCAAAATATGTACTCAATCGTACGTGTGAAAATTCAAGAAACAAATTTGCAATATGATGATAAGGAAATTATTGTAGTTG
GTTATTTTCCTCAACTGCAAATGGATGAACAGTACCGTTTTACAGGAATTATGAGACAACATCCAAAATATGGTGTACAA
TTTCAAGTTGAGACGTTTACAAAAGAAGTGCCCGCTACTGAGCAAGGAATCGTTCACTACTTATCAAGTGACTTATTTGT
TGGTATTGGCAAGAAAACGGCTGAAACAATTGTTGAAAAACTTGGTGCAAATGCAATCCGTCGTATATTAGAAGATCCGA
ATGTCCTAGATGCAGTACCTCGTCTCTCTGCGGAAAAAAAGGAAGTTATCCATCGGACGATTGAGCAAAACCTTGGCTTA
GAACGTGTTATGATTCAACTGAACGAATGGGGATTTGGCCCGCAACTCGGTATGAAAATTTATCAAACGTATCGTACAGA
AACGATTGATTTTTTGACGGAGAATCCTTATCGACTCATTGAAGATGTGGATGGTGTCGGTTTCTTTCGGGCAGATGAAC
TTGGTGCAAAATTAGGAATTACGGGCAATCATCCAGACCGTATTAAGGCGGCCATTTTACATATTCTAAATACAGCTGCA
TTATCGGATGGTCATGTATTTTTAGATGCAGAGCATGTGTTACCGCAAGTGAAAGGTATGCTTGAGCAAAGCCAGCGTCA
AGAAATACCATATGAAGCTATTTCTAAAGCATGTATTGAAATGCGTGAAGAAAATAAAATATATGGTGAAGAAACAAGAC
TATATTTGCCATCGCTCTATTTTTCTGAAATAGGCATTGCGTCAAAAATTATTGCTTTAACTGAACGCAATAGTCAGGCG
AAGCATTTTAGTAAAGATGAAATTCGCAAGGCTATCGGTGATACGGAAGCTTTTCTCAACGTTACCTATGCGGAAACGCA
AGCAAATGCCATTGAACAAGCGCTGAATTCGGCTGTGATGATTTTAACGGGTGGTCCTGGGACAGGGAAAACGACGGTTG
TCAGAGGGATTGTAGAAGTATACGCCAAGCTTCATGGGCTATCGCTTAATCCTAAGGAATATGCACAAAAAGAAGAGCCA
TTCCCAATCATTTTATGTGCGCCAACAGGTCGTGCTGCTAAACGATTAGCCGAATCGACGGAACTACCTGCTATGACAAT
TCACCGCTTGTTAGGTTTTACTGGTCAGGAGAAAGAGGAAGAAACGGAGCGCGAAGTAACTGGTAAACTGATTATTGTCG
ATGAAATGTCTATGGTGGATACATGGCTTGCCCATCAATTATTAAAATCATTGCATGAAGATGTTCAAGTTGTGTTTGTT
GGAGATCAGGATCAGTTACCACCAGTAGGACCTGGACAAGTATTGAAAGATTTACTTGCATCAAAACAAATTCCGACTGT
TGAACTGACAGATGTTTATCGTCAGGCGGAAGGTTCAACGATTATTGAGCTTGCCCATCAAATTAAGCGCGGTACTATTC
CGCAAGATTTGACGATGAAAACATCGGATCGTTCATTTATTAAAGCTTCATCAGATCAAGTGGCGAACGTTGTCACGCAA
GTTGTTAAAAGTGCAGTGACAAAAGGGCAAGAAATTCGTAATATCCAAGTTTTAGCGCCCATGTATAAAGGGCCGGCTGG
CATTGATAATTTAAATAAAATGATTCAAGACCTTGTGAATCCGAATGATACGGGTTCAAGAAAGGAACTTGTTTTTGGCG
ATGTTACGTATCGCATTAAAGATAAAGTACTGCAGCTTGTTAATCAGCCAGAAAGTAATGTCTTTAACGGTGATATGGGA
GAGGTCATTAGTATTATTAAAGCGAAAGAAACGATTGATAAGCAAGATTTGCTTGTTGTGTCATTTGACGGCATAGAAGT
TACTTACCAACGTAGCGACCTTAATCAGTTAACATTAGCTTATTGTTGTTCTATCCATAAATCACAGGGCTCAGAGTTTC
AAACAGTCATTATGCCGGTTGTGCGTGGCTATTCTAAAATGCTTCGTCGGAATTTGTTATATACCGGTATTACAAGGGCG
AAAAACTTCTTAATTTTATGCGGTGAGCCAGATGTTTTAGCGAATGGCTTACAACGTACAGATGATTTACAACGATTTAC
ATCACTTCGAGCAAGATTGAACCCAATGGAAGCAGTCAATGAGGTTGTTGAAGTAGAAGTGATAGACGAGGAAACAAAGG
AAGTAGAAGGCCAACAAGAGGCTTCTACGGCTGTTCTACAGCTAACTGTAGAAACGGTGCCTACTATTCATCCGATGATT
GGCATGGAAGGTATTTCTCCATACGATTTTATGGATGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• AAA domain (AAA_30) (343-550)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-661)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.023	97.663	0.518