Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACKKE8_RS30490 Genome accession   NZ_CP176370
Coordinates   6300370..6301323 (-) Length   317 a.a.
NCBI ID   WP_409176283.1    Uniprot ID   -
Organism   Brevibacillus fortis strain LJQJ21     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 6295370..6306323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKKE8_RS30465 (ACKKE8_30465) - 6295757..6296620 (+) 864 WP_409176278.1 ABC transporter ATP-binding protein -
  ACKKE8_RS30470 (ACKKE8_30470) - 6296837..6297493 (+) 657 WP_409176279.1 DJ-1/PfpI family protein -
  ACKKE8_RS30475 (ACKKE8_30475) - 6297589..6298575 (-) 987 WP_409176280.1 siderophore ABC transporter substrate-binding protein -
  ACKKE8_RS30480 (ACKKE8_30480) - 6298680..6299438 (-) 759 WP_409176281.1 ABC transporter ATP-binding protein -
  ACKKE8_RS30485 (ACKKE8_30485) - 6299435..6300373 (-) 939 WP_409176282.1 iron chelate uptake ABC transporter family permease subunit -
  ACKKE8_RS30490 (ACKKE8_30490) ceuB 6300370..6301323 (-) 954 WP_409176283.1 ABC transporter permease Machinery gene
  ACKKE8_RS30495 (ACKKE8_30495) - 6301574..6302338 (-) 765 WP_409176284.1 DUF4097 family beta strand repeat-containing protein -
  ACKKE8_RS30500 (ACKKE8_30500) - 6302537..6303211 (+) 675 WP_409176285.1 Crp/Fnr family transcriptional regulator -
  ACKKE8_RS30505 (ACKKE8_30505) - 6303298..6303660 (+) 363 WP_088909948.1 carboxymuconolactone decarboxylase family protein -
  ACKKE8_RS30510 (ACKKE8_30510) - 6303855..6304211 (+) 357 WP_409176286.1 response regulator -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35103.39 Da        Isoelectric Point: 9.7592

>NTDB_id=1079819 ACKKE8_RS30490 WP_409176283.1 6300370..6301323(-) (ceuB) [Brevibacillus fortis strain LJQJ21]
MKKRYLVVALILLSFVSLFIGVKNISPWDLFNLTDDKVQVLWISRIPRLISIIIAGISMSIVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILISLLVFVDAGPWVKLLVAFAFSLLGTFIFMKILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKYDLM
QNMSAWLHGDFSTIMKGSYELLYISIPLVIIAYLYANKFTIAGMGEEFAINLGLNYKQVVNIGLIIVACVTSVVILTVGA
IPFLGLIIPNLVTLYLGDNLKKSLGHTALLGAVFVLACDILGRLIIFPYEISIGLMVGVIGSGVFVYLLMRRKAYEQ

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1079819 ACKKE8_RS30490 WP_409176283.1 6300370..6301323(-) (ceuB) [Brevibacillus fortis strain LJQJ21]
ATGAAAAAGAGATATTTGGTTGTAGCACTTATTTTGCTATCGTTCGTTTCACTTTTTATTGGCGTGAAAAATATATCTCC
GTGGGATCTGTTCAATCTCACAGATGACAAAGTGCAAGTATTATGGATCAGCCGGATTCCGCGATTAATCAGTATCATCA
TCGCAGGGATAAGCATGAGTATCGTCGGTTTGATCATGCAGCAGTTGACCCGAAACAAGTTTGTTTCGCCCACGACTGCG
GGAACAGAGGATTCCGTTCGCTTCGGAATATTGATCTCTCTCCTGGTTTTCGTTGATGCCGGTCCATGGGTAAAGCTGCT
CGTTGCTTTTGCTTTCTCACTCTTGGGAACGTTTATCTTTATGAAGATCCTTGATCGAATCAAATTCAAGGACTCCATTT
TCATTCCGTTGGTGGGATTGATGTTTGGGAATATCGTCGGTTCTATTACGACGTTTTTCGCTTATAAGTACGACCTGATG
CAAAACATGTCTGCTTGGTTGCATGGAGATTTCTCCACCATTATGAAGGGCAGCTACGAGCTTTTGTACATAAGCATTCC
GCTGGTGATTATCGCCTACCTGTATGCGAATAAGTTCACGATTGCCGGAATGGGTGAGGAGTTCGCCATCAACCTCGGGC
TGAACTACAAGCAGGTCGTCAATATCGGATTAATCATCGTTGCATGTGTGACGTCGGTTGTGATTCTCACGGTAGGGGCG
ATTCCGTTTTTGGGACTTATCATTCCAAATCTGGTGACGCTGTACTTGGGGGACAACCTGAAGAAAAGCTTGGGGCATAC
CGCATTGCTTGGCGCGGTGTTTGTACTTGCCTGTGATATCCTGGGACGCCTCATTATCTTCCCATACGAGATTTCCATCG
GCTTGATGGTTGGGGTCATAGGCAGCGGGGTATTCGTGTACTTACTCATGAGAAGAAAGGCATATGAACAATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.952

98.738

0.543

Multiple sequence alignment