Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ACKVMU_RS03970 Genome accession   NZ_CP176094
Coordinates   846283..847962 (+) Length   559 a.a.
NCBI ID   WP_010735994.1    Uniprot ID   A0A1V2UJY5
Organism   Enterococcus mundtii strain Dm     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 841283..852962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKVMU_RS03940 (ACKVMU_03940) - 841582..842436 (+) 855 WP_010736000.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  ACKVMU_RS03945 (ACKVMU_03945) xseA 842433..843773 (+) 1341 WP_010735999.1 exodeoxyribonuclease VII large subunit -
  ACKVMU_RS03950 (ACKVMU_03950) - 843775..844002 (+) 228 WP_010735998.1 exodeoxyribonuclease VII small subunit -
  ACKVMU_RS03955 (ACKVMU_03955) - 843999..844886 (+) 888 WP_023519346.1 polyprenyl synthetase family protein -
  ACKVMU_RS03960 (ACKVMU_03960) - 844895..845716 (+) 822 WP_010735996.1 TlyA family RNA methyltransferase -
  ACKVMU_RS03965 (ACKVMU_03965) - 845816..846265 (+) 450 WP_010735995.1 arginine repressor -
  ACKVMU_RS03970 (ACKVMU_03970) recN 846283..847962 (+) 1680 WP_010735994.1 DNA repair protein RecN Machinery gene
  ACKVMU_RS03975 (ACKVMU_03975) - 848817..850274 (+) 1458 WP_409173770.1 hypothetical protein -
  ACKVMU_RS03980 (ACKVMU_03980) - 850329..850943 (+) 615 WP_010735992.1 hypothetical protein -
  ACKVMU_RS03985 (ACKVMU_03985) - 851131..852282 (+) 1152 WP_409173771.1 hypothetical protein -
  ACKVMU_RS03990 (ACKVMU_03990) - 852269..852868 (+) 600 WP_137072067.1 hypothetical protein -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 62836.90 Da        Isoelectric Point: 4.4456

>NTDB_id=1079672 ACKVMU_RS03970 WP_010735994.1 846283..847962(+) (recN) [Enterococcus mundtii strain Dm]
MLQEISITNFAIIPELRLSFHEGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGADKCILEGLFEWPKQEGFEALM
EELGIESDGSNLIVRRDMSLAGKNVCRVNGHIVTLANLRRVGSYLVDIQGQNEHQELLQPESHLVLLDRFGDSTFQQKKR
AYQEAYQAYRELERKVRKIQQNEKNYVQRIDMLNFQQEEIAAAQLEVGEEEKLREERDKLSNYQKIVDGLATAYGALSEG
EQSSLDGVGMAVSEIQSIAHLDSEYEAIFDNIQSAYYLLQDAVGDMSRQIDLLELDENRLEEVTQRMETIRQLKRKYGDS
VEAILAYYEEITEELDSSDFTEGQLDKMKNELTQKEEWAFQCAEELHQARKAIASDLEQSILRELKSLYMENTEFEVRFS
TQANGRLDEQGFDIVEFYITTNPGEPLKPLVKVASGGELSRVLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
LKISKYSQVLCITHLPQVAAVADYQYYIVKEVVGGRTQTSVAELAAAERENEIARMLAGSEITPLTIEHAKELLRLAKK

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=1079672 ACKVMU_RS03970 WP_010735994.1 846283..847962(+) (recN) [Enterococcus mundtii strain Dm]
ATGCTACAAGAAATCAGTATCACCAATTTTGCGATTATTCCTGAATTGCGTTTGTCGTTTCATGAAGGAATGACAGCATT
AACAGGAGAAACCGGAGCCGGTAAGTCAATTATTATTGATGCTTTGGGCTTATTAGCAGGTGGTCGCGGATCAAGTGATT
ATATTCGTCAAGGTGCCGATAAATGTATTCTGGAAGGGTTGTTTGAATGGCCTAAACAAGAAGGTTTTGAAGCATTGATG
GAAGAGTTAGGGATTGAGTCCGATGGTTCAAATCTGATCGTCCGTCGAGATATGTCTTTAGCAGGTAAGAATGTTTGTCG
AGTGAATGGACATATCGTGACATTAGCGAATTTGCGACGCGTAGGTAGTTATTTAGTGGATATCCAAGGTCAAAATGAAC
ATCAGGAACTATTACAACCTGAATCACATCTTGTGTTACTTGATCGTTTTGGAGACTCGACATTCCAACAGAAAAAAAGA
GCGTACCAAGAAGCCTATCAAGCGTATCGTGAACTTGAAAGAAAAGTACGTAAGATCCAACAAAACGAAAAAAACTATGT
CCAACGTATCGATATGTTGAATTTCCAACAAGAAGAAATCGCAGCCGCCCAATTAGAAGTTGGTGAAGAAGAAAAACTTC
GAGAAGAGCGCGATAAATTAAGTAATTATCAAAAAATCGTCGATGGTTTAGCTACTGCTTATGGGGCGCTCAGTGAAGGT
GAACAAAGTAGTCTTGATGGGGTGGGAATGGCTGTTTCCGAGATCCAAAGTATTGCCCACCTTGATTCAGAGTATGAAGC
AATTTTTGATAATATCCAGAGTGCCTATTATTTATTGCAAGATGCAGTAGGGGACATGAGCAGGCAAATCGATCTGCTTG
AACTGGATGAGAATCGTTTGGAAGAAGTGACGCAACGCATGGAAACGATTCGCCAATTGAAGCGTAAATATGGCGATTCA
GTTGAAGCTATCTTAGCCTACTATGAAGAAATCACAGAAGAATTGGATTCATCTGATTTTACAGAAGGTCAACTTGATAA
AATGAAGAATGAACTGACTCAAAAAGAAGAGTGGGCGTTTCAATGTGCAGAAGAACTCCATCAAGCAAGAAAAGCGATCG
CCAGTGACTTAGAACAGTCGATTCTGCGTGAATTAAAGAGTCTTTATATGGAAAACACCGAATTTGAAGTTCGTTTTTCA
ACGCAAGCAAATGGACGCTTAGATGAGCAAGGTTTTGATATTGTCGAATTTTATATCACGACAAATCCTGGAGAACCATT
GAAGCCACTAGTCAAGGTAGCATCAGGTGGGGAATTGTCACGAGTATTACTTGCTCTGAAAACCATTTTTTCTTCGGAAC
AAGGTGTGACTAGTATCATTTTTGACGAAGTTGATACTGGTGTTAGTGGCAGAGTGGCACAAGCCATTGCGGATAAAATA
TTGAAAATATCCAAATATTCCCAAGTACTTTGTATCACGCATCTTCCTCAAGTGGCGGCGGTAGCGGATTATCAATATTA
CATTGTAAAAGAAGTCGTCGGCGGAAGAACACAAACATCCGTCGCCGAATTAGCTGCAGCTGAAAGAGAAAATGAAATCG
CACGAATGTTAGCGGGAAGTGAAATCACGCCTTTAACGATCGAACACGCCAAAGAGTTGTTACGTTTGGCGAAAAAATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V2UJY5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

50.526

100

0.515

Multiple sequence alignment