Detailed information NTG1079192

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACJ9UN_RS04145
• Genome accession: NZ_CP175928
• Coordinates: 893068..894171 (-)
• Length: 367 a.a.
• NCBI ID: WP_049334427.1
• Uniprot ID: A0AAP3EVI0
• Organism: Riemerella anatipestifer strain RAf950
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 888068..899171

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ9UN_RS04120 (ACJ9UN_04120)	comF	889263..889916 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
ACJ9UN_RS04130 (ACJ9UN_04130)	-	890138..890689 (-)	552	WP_004918080.1	hypothetical protein	-
ACJ9UN_RS04135 (ACJ9UN_04135)	-	890744..891394 (-)	651	WP_004918082.1	HD domain-containing protein	-
ACJ9UN_RS04140 (ACJ9UN_04140)	gdhA	891526..892884 (-)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
ACJ9UN_RS04145 (ACJ9UN_04145)	dprA	893068..894171 (-)	1104	WP_049334427.1	DNA-processing protein DprA	Machinery gene
ACJ9UN_RS04150 (ACJ9UN_04150)	-	894174..894551 (-)	378	WP_049334428.1	group III truncated hemoglobin	-
ACJ9UN_RS04155 (ACJ9UN_04155)	ruvC	894562..895116 (-)	555	WP_049334429.1	crossover junction endodeoxyribonuclease RuvC	-
ACJ9UN_RS04160 (ACJ9UN_04160)	-	895140..896330 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
ACJ9UN_RS04165 (ACJ9UN_04165)	-	896360..896833 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40371.22 Da
• Isoelectric Point: 6.3958

>NTDB_id=1079192 ACJ9UN_RS04145 WP_049334427.1 893068..894171(-) (dprA) [Riemerella anatipestifer strain RAf950]
MVNAEEILYSIALRRSSLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=1079192 ACJ9UN_RS04145 WP_049334427.1 893068..894171(-) (dprA) [Riemerella anatipestifer strain RAf950]
ATGGTAAATGCAGAAGAAATTTTATACTCTATTGCTTTACGGCGAAGCTCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTGAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACACATTGTTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.005	100	0.94