Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ACJJTF_RS07050 Genome accession   NZ_CP175908
Coordinates   1345899..1346363 (-) Length   154 a.a.
NCBI ID   WP_015417366.1    Uniprot ID   -
Organism   Bacillus velezensis strain SJ22     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1340899..1351363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJJTF_RS07030 (ACJJTF_07030) - 1341380..1343200 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  ACJJTF_RS07035 (ACJJTF_07035) - 1343181..1344394 (-) 1214 Protein_1326 aminotransferase A -
  ACJJTF_RS07040 (ACJJTF_07040) - 1344595..1344756 (-) 162 WP_007409608.1 hypothetical protein -
  ACJJTF_RS07045 (ACJJTF_07045) cheV 1344945..1345856 (+) 912 WP_015417365.1 chemotaxis protein CheV -
  ACJJTF_RS07050 (ACJJTF_07050) kre 1345899..1346363 (-) 465 WP_015417366.1 YkyB family protein Regulator
  ACJJTF_RS07055 (ACJJTF_07055) - 1346486..1347778 (-) 1293 WP_015239757.1 MFS transporter -
  ACJJTF_RS07060 (ACJJTF_07060) - 1347854..1348348 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  ACJJTF_RS07065 (ACJJTF_07065) - 1348423..1349286 (-) 864 WP_061890567.1 metallophosphoesterase -
  ACJJTF_RS07070 (ACJJTF_07070) fadH 1349430..1350194 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  ACJJTF_RS07075 (ACJJTF_07075) - 1350308..1350857 (+) 550 Protein_1334 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.62 Da        Isoelectric Point: 10.5281

>NTDB_id=1079053 ACJJTF_RS07050 WP_015417366.1 1345899..1346363(-) (kre) [Bacillus velezensis strain SJ22]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAAKRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1079053 ACJJTF_RS07050 WP_015417366.1 1345899..1346363(-) (kre) [Bacillus velezensis strain SJ22]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAAAAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.208

100

0.922

Multiple sequence alignment