Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACJJTF_RS05590 Genome accession   NZ_CP175908
Coordinates   1081636..1081827 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain SJ22     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1076636..1086827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJJTF_RS05560 (ACJJTF_05560) argF 1077488..1078459 (+) 972 WP_031378491.1 ornithine carbamoyltransferase -
  ACJJTF_RS05565 (ACJJTF_05565) - 1078535..1078714 (+) 180 WP_003155070.1 YjzC family protein -
  ACJJTF_RS05570 (ACJJTF_05570) - 1078751..1078936 (-) 186 WP_003155069.1 YjzD family protein -
  ACJJTF_RS05575 (ACJJTF_05575) - 1079197..1079931 (+) 735 WP_033574514.1 hypothetical protein -
  ACJJTF_RS05580 (ACJJTF_05580) - 1080014..1080580 (+) 567 WP_015417204.1 NAD(P) binding enzyme -
  ACJJTF_RS05585 (ACJJTF_05585) med 1080670..1081623 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  ACJJTF_RS05590 (ACJJTF_05590) comZ 1081636..1081827 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ACJJTF_RS05595 (ACJJTF_05595) - 1081856..1082074 (-) 219 WP_007409123.1 hypothetical protein -
  ACJJTF_RS05600 (ACJJTF_05600) - 1082242..1083180 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ACJJTF_RS05605 (ACJJTF_05605) fabF 1083203..1084441 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  ACJJTF_RS05610 (ACJJTF_05610) - 1084524..1085309 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  ACJJTF_RS05615 (ACJJTF_05615) - 1085483..1086469 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1079046 ACJJTF_RS05590 WP_003155061.1 1081636..1081827(+) (comZ) [Bacillus velezensis strain SJ22]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1079046 ACJJTF_RS05590 WP_003155061.1 1081636..1081827(+) (comZ) [Bacillus velezensis strain SJ22]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment