Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACJ23D_RS11085 | Genome accession | NZ_CP175804 |
| Coordinates | 2278737..2279117 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain BAL114 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2273737..2284117
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ23D_RS11055 (ACJ23D_11055) | tadA | 2273855..2274358 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ACJ23D_RS11060 (ACJ23D_11060) | - | 2274365..2275489 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACJ23D_RS11065 (ACJ23D_11065) | ung | 2275486..2276199 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACJ23D_RS11070 (ACJ23D_11070) | - | 2276250..2276846 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ACJ23D_RS11075 (ACJ23D_11075) | gspK | 2277077..2278036 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACJ23D_RS11080 (ACJ23D_11080) | xcpW | 2278036..2278737 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACJ23D_RS11085 (ACJ23D_11085) | xcpV | 2278737..2279117 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACJ23D_RS11090 (ACJ23D_11090) | - | 2279107..2279661 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACJ23D_RS11095 (ACJ23D_11095) | - | 2279671..2280279 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACJ23D_RS11100 (ACJ23D_11100) | - | 2280317..2281090 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACJ23D_RS11105 (ACJ23D_11105) | - | 2281108..2281449 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACJ23D_RS11110 (ACJ23D_11110) | - | 2281461..2282441 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACJ23D_RS11115 (ACJ23D_11115) | kdsB | 2282453..2283214 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1078929 ACJ23D_RS11085 WP_000836911.1 2278737..2279117(-) (xcpV) [Acinetobacter baumannii strain BAL114]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1078929 ACJ23D_RS11085 WP_000836911.1 2278737..2279117(-) (xcpV) [Acinetobacter baumannii strain BAL114]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |