Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACJ9PY_RS25020 Genome accession   NZ_CP175708
Coordinates   5199699..5200649 (-) Length   316 a.a.
NCBI ID   WP_053536781.1    Uniprot ID   A0A9X1IUS9
Organism   Peribacillus sp. S4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5194699..5205649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJ9PY_RS25005 (ACJ9PY_25005) - 5196852..5197796 (-) 945 WP_411740332.1 siderophore ABC transporter substrate-binding protein -
  ACJ9PY_RS25010 (ACJ9PY_25010) - 5198007..5198765 (-) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  ACJ9PY_RS25015 (ACJ9PY_25015) - 5198759..5199706 (-) 948 WP_034310068.1 iron chelate uptake ABC transporter family permease subunit -
  ACJ9PY_RS25020 (ACJ9PY_25020) ceuB 5199699..5200649 (-) 951 WP_053536781.1 ABC transporter permease Machinery gene
  ACJ9PY_RS25025 (ACJ9PY_25025) - 5200915..5201256 (+) 342 WP_231892147.1 DUF1450 domain-containing protein -
  ACJ9PY_RS25030 (ACJ9PY_25030) - 5201475..5203124 (+) 1650 WP_411739222.1 M14 family metallopeptidase -
  ACJ9PY_RS25035 (ACJ9PY_25035) shc 5203288..5205183 (+) 1896 WP_411739223.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34941.26 Da        Isoelectric Point: 9.6490

>NTDB_id=1078770 ACJ9PY_RS25020 WP_053536781.1 5199699..5200649(-) (ceuB) [Peribacillus sp. S4]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1078770 ACJ9PY_RS25020 WP_053536781.1 5199699..5200649(-) (ceuB) [Peribacillus sp. S4]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTGTCCCCGACGACTGCC
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTTGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTGAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGAGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGTTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATACTGGGCAGGATCCTTATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503

Multiple sequence alignment