Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACJYUN_RS17185 Genome accession   NZ_CP175678
Coordinates   3396556..3397152 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain L5151     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 3391556..3402152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJYUN_RS17170 (ACJYUN_17170) helD 3391764..3393818 (-) 2055 WP_009308304.1 DNA helicase IV -
  ACJYUN_RS17175 (ACJYUN_17175) - 3393943..3394389 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACJYUN_RS17180 (ACJYUN_17180) yccS 3394407..3396542 (+) 2136 WP_060568535.1 YccS family putative transporter -
  ACJYUN_RS17185 (ACJYUN_17185) sxy/tfoX 3396556..3397152 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACJYUN_RS17190 (ACJYUN_17190) - 3397243..3397458 (+) 216 WP_009485781.1 hypothetical protein -
  ACJYUN_RS17195 (ACJYUN_17195) sulA 3397501..3398010 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  ACJYUN_RS17200 (ACJYUN_17200) ompA 3398363..3399433 (+) 1071 WP_002898408.1 porin OmpA -
  ACJYUN_RS17205 (ACJYUN_17205) matP 3399565..3400017 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACJYUN_RS17210 (ACJYUN_17210) - 3400203..3401960 (+) 1758 WP_032103551.1 Lon protease family protein -

Sequence


Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1078673 ACJYUN_RS17185 WP_004150836.1 3396556..3397152(-) (sxy/tfoX) [Klebsiella pneumoniae strain L5151]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1078673 ACJYUN_RS17185 WP_004150836.1 3396556..3397152(-) (sxy/tfoX) [Klebsiella pneumoniae strain L5151]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51


Multiple sequence alignment