Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACJ228_RS06845 Genome accession   NZ_CP175642
Coordinates   1446693..1447577 (-) Length   294 a.a.
NCBI ID   WP_059247092.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain G7     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1441693..1452577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJ228_RS06830 (ACJ228_06830) miaB 1443540..1444991 (+) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  ACJ228_RS06835 (ACJ228_06835) - 1445029..1446117 (+) 1089 WP_000122983.1 PhoH family protein -
  ACJ228_RS06840 (ACJ228_06840) ybeY 1446127..1446603 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  ACJ228_RS06845 (ACJ228_06845) tonB2 1446693..1447577 (-) 885 WP_059247092.1 energy transducer TonB Machinery gene
  ACJ228_RS06850 (ACJ228_06850) - 1447808..1448479 (+) 672 WP_001193960.1 hypothetical protein -
  ACJ228_RS06855 (ACJ228_06855) - 1448636..1449349 (+) 714 WP_000201544.1 DUF3108 domain-containing protein -
  ACJ228_RS06860 (ACJ228_06860) - 1449422..1449997 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  ACJ228_RS06865 (ACJ228_06865) wrbA 1450050..1450643 (-) 594 WP_001183353.1 NAD(P)H:quinone oxidoreductase -
  ACJ228_RS06870 (ACJ228_06870) - 1450931..1452178 (+) 1248 WP_000893466.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33659.55 Da        Isoelectric Point: 8.3773

>NTDB_id=1078329 ACJ228_RS06845 WP_059247092.1 1446693..1447577(-) (tonB2) [Acinetobacter baumannii strain G7]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPVPSEQSTKEIAISIHPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDVNMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=1078329 ACJ228_RS06845 WP_059247092.1 1446693..1447577(-) (tonB2) [Acinetobacter baumannii strain G7]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGTGCCGTCAGAACAATCGACTAAAGAAATCG
CAATATCGATTCATCCTACTGAAGATGTAATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
AAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGCTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCATTTGGCCGTTTTGA
TGTAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

98.98

100

0.99

Multiple sequence alignment