Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACJVC9_RS12210 Genome accession   NZ_CP175625
Coordinates   2444129..2444755 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain NY1461     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2439129..2449755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC9_RS12195 (ACJVC9_12195) helD 2439368..2441422 (-) 2055 WP_045911586.1 DNA helicase IV -
  ACJVC9_RS12200 (ACJVC9_12200) - 2441545..2441991 (+) 447 WP_003858149.1 YccF domain-containing protein -
  ACJVC9_RS12205 (ACJVC9_12205) yccS 2442010..2444172 (+) 2163 WP_045911585.1 YccS family putative transporter -
  ACJVC9_RS12210 (ACJVC9_12210) sxy/tfoX 2444129..2444755 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  ACJVC9_RS12215 (ACJVC9_12215) sulA 2444973..2445482 (+) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  ACJVC9_RS12220 (ACJVC9_12220) ompA 2445839..2446891 (+) 1053 WP_108376575.1 porin OmpA -
  ACJVC9_RS12225 (ACJVC9_12225) matP 2446957..2447409 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  ACJVC9_RS12230 (ACJVC9_12230) - 2447596..2449356 (+) 1761 WP_045911584.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=1078288 ACJVC9_RS12210 WP_017384804.1 2444129..2444755(-) (sxy/tfoX) [Enterobacter hormaechei strain NY1461]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1078288 ACJVC9_RS12210 WP_017384804.1 2444129..2444755(-) (sxy/tfoX) [Enterobacter hormaechei strain NY1461]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment