Detailed information NTG1078181

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACKFA7_RS19215
• Genome accession: NZ_CP175553
• Coordinates: 3927969..3929081 (+)
• Length: 370 a.a.
• NCBI ID: WP_007409910.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain 4-9-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3922969..3934081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKFA7_RS19190 (ACKFA7_19190)	rnpA	3923681..3924031 (-)	351	WP_038464561.1	ribonuclease P protein component	-
ACKFA7_RS19195 (ACKFA7_19195)	rpmH	3924186..3924320 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
ACKFA7_RS19200 (ACKFA7_19200)	dnaA	3924942..3926282 (+)	1341	WP_007409908.1	chromosomal replication initiator protein DnaA	-
ACKFA7_RS19205 (ACKFA7_19205)	dnaN	3926467..3927603 (+)	1137	WP_038463542.1	DNA polymerase III subunit beta	-
ACKFA7_RS19210 (ACKFA7_19210)	rlbA	3927738..3927953 (+)	216	WP_004392910.1	ribosome maturation protein RlbA	-
ACKFA7_RS19215 (ACKFA7_19215)	recF	3927969..3929081 (+)	1113	WP_007409910.1	DNA replication/repair protein RecF	Machinery gene
ACKFA7_RS19220 (ACKFA7_19220)	remB	3929099..3929344 (+)	246	WP_004392908.1	extracellular matrix regulator RemB	-
ACKFA7_RS19225 (ACKFA7_19225)	gyrB	3929401..3931317 (+)	1917	WP_007409911.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
ACKFA7_RS19230 (ACKFA7_19230)	gyrA	3931533..3933992 (+)	2460	WP_032875298.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42430.36 Da
• Isoelectric Point: 7.0882

>NTDB_id=1078181 ACKFA7_RS19215 WP_007409910.1 3927969..3929081(+) (recF) [Bacillus amyloliquefaciens strain 4-9-2]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVAKRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHDTLHQAGMFRVENGTLVK

Nucleotide

• Length: 1113 bp

>NTDB_id=1078181 ACKFA7_RS19215 WP_007409910.1 3927969..3929081(+) (recF) [Bacillus amyloliquefaciens strain 4-9-2]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGGGAAAATGCCCAAGGCAAAACCAATCTAATGGAAGCCATCTATGTCCTTTCGATGGCAAAGTCACACCGCA
CCTCAAATGACAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGTAACGGGGAC
ATCCCGATGCAGCTTGTCATCTCCAAAAAAGGTAAAAAGGGCAAGGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCTGAGGATTTAAATCTCGTCAAAGGAAGCCCTCAGGTGAGGAGGAGAT
TTCTCGATATGGAGATCGGGCAGGTTTCTGCCGTTTATCTGTATGATTTATCTCTTTATCAAAAAATCCTTTCACAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACTATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCAAAAGTTGTCGCCAAACGTCTGCAGTTTACGGCGCAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGACTTGAAGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAGTCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGACCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACGTACGGTTCACAGGGACAGCAGCGTACGACGGCTTTGT
CTTTGAAGCTGGCCGAAATAGATTTGATTCATGAAGAAATCGGAGAATACCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGACAGTCCCATTTGCTTCATACGATCCAAGGCCGTGTGCAGACATTTGTCACCACGACAAGCGT
GGATGGCATTGACCACGATACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTACGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.324	100	0.943