Detailed information NTG1078073

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACJ1CH_RS18340
• Genome accession: NZ_CP175541
• Coordinates: 3693847..3694992 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Tcba05
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3688847..3699992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ1CH_RS18320 (ACJ1CH_18320)	-	3689322..3690038 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
ACJ1CH_RS18325 (ACJ1CH_18325)	narK	3690136..3691326 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
ACJ1CH_RS18330 (ACJ1CH_18330)	argS	3691460..3693130 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
ACJ1CH_RS18335 (ACJ1CH_18335)	-	3693127..3693555 (-)	429	WP_003151069.1	DUF1934 domain-containing protein	-
ACJ1CH_RS18340 (ACJ1CH_18340)	rapF	3693847..3694992 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
ACJ1CH_RS18345 (ACJ1CH_18345)	-	3694976..3695095 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACJ1CH_RS18350 (ACJ1CH_18350)	speB	3695218..3695655 (-)	438	Protein_3555	agmatinase	-
ACJ1CH_RS18355 (ACJ1CH_18355)	-	3695817..3697244 (-)	1428	WP_046341451.1	DUF885 family protein	-
ACJ1CH_RS18360 (ACJ1CH_18360)	-	3697245..3698585 (-)	1341	WP_025853604.1	MATE family efflux transporter	-
ACJ1CH_RS18365 (ACJ1CH_18365)	-	3698582..3699637 (-)	1056	WP_046341452.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=1078073 ACJ1CH_RS18340 WP_024085922.1 3693847..3694992(+) (rapF) [Bacillus velezensis strain Tcba05]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1078073 ACJ1CH_RS18340 WP_024085922.1 3693847..3694992(+) (rapF) [Bacillus velezensis strain Tcba05]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533