Detailed information NTG1078022

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACJ1CH_RS05555
• Genome accession: NZ_CP175541
• Coordinates: 1107002..1107955 (+)
• Length: 317 a.a.
• NCBI ID: WP_003155063.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Tcba05
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1102002..1112955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ1CH_RS05530 (ACJ1CH_05530)	argF	1103820..1104791 (+)	972	WP_015388451.1	ornithine carbamoyltransferase	-
ACJ1CH_RS05535 (ACJ1CH_05535)	-	1104867..1105046 (+)	180	WP_003155070.1	YjzC family protein	-
ACJ1CH_RS05540 (ACJ1CH_05540)	-	1105083..1105268 (-)	186	WP_003155069.1	YjzD family protein	-
ACJ1CH_RS05545 (ACJ1CH_05545)	-	1105529..1106263 (+)	735	WP_015388450.1	hypothetical protein	-
ACJ1CH_RS05550 (ACJ1CH_05550)	-	1106346..1106912 (+)	567	WP_003155065.1	hypothetical protein	-
ACJ1CH_RS05555 (ACJ1CH_05555)	med	1107002..1107955 (+)	954	WP_003155063.1	BMP family ABC transporter substrate-binding protein	Regulator
ACJ1CH_RS05560 (ACJ1CH_05560)	comZ	1107968..1108159 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ACJ1CH_RS05565 (ACJ1CH_05565)	-	1108189..1108407 (-)	219	WP_003155059.1	hypothetical protein	-
ACJ1CH_RS05570 (ACJ1CH_05570)	-	1108575..1109513 (+)	939	WP_003155057.1	beta-ketoacyl-ACP synthase III	-
ACJ1CH_RS05575 (ACJ1CH_05575)	fabF	1109536..1110774 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
ACJ1CH_RS05580 (ACJ1CH_05580)	-	1110858..1111643 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACJ1CH_RS05585 (ACJ1CH_05585)	-	1111817..1112803 (+)	987	WP_003155054.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35345.94 Da
• Isoelectric Point: 4.5594

>NTDB_id=1078022 ACJ1CH_RS05555 WP_003155063.1 1107002..1107955(+) (med) [Bacillus velezensis strain Tcba05]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1078022 ACJ1CH_RS05555 WP_003155063.1 1107002..1107955(+) (med) [Bacillus velezensis strain Tcba05]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCTTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAGGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785