Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACKE5C_RS14290 Genome accession   NZ_CP175539
Coordinates   2722070..2723023 (-) Length   317 a.a.
NCBI ID   WP_057900457.1    Uniprot ID   A0A1G7YFC1
Organism   Aneurinibacillus thermoaerophilus strain AFn2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Genomic island 2721130..2767578 2722070..2723023 within 0


Gene organization within MGE regions


Location: 2721130..2767578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKE5C_RS14285 (ACKE5C_14285) - 2721130..2722080 (-) 951 WP_057900458.1 iron chelate uptake ABC transporter family permease subunit -
  ACKE5C_RS14290 (ACKE5C_14290) ceuB 2722070..2723023 (-) 954 WP_057900457.1 ABC transporter permease Machinery gene
  ACKE5C_RS14295 (ACKE5C_14295) - 2723368..2723547 (-) 180 Protein_2720 sigma factor -
  ACKE5C_RS14300 (ACKE5C_14300) - 2723537..2725150 (-) 1614 WP_220559057.1 recombinase family protein -
  ACKE5C_RS14305 (ACKE5C_14305) - 2725506..2725646 (-) 141 WP_220559058.1 hypothetical protein -
  ACKE5C_RS14310 (ACKE5C_14310) - 2726073..2726558 (-) 486 WP_220559059.1 VanZ family protein -
  ACKE5C_RS14315 (ACKE5C_14315) - 2726642..2726920 (-) 279 WP_220559060.1 hypothetical protein -
  ACKE5C_RS14320 (ACKE5C_14320) - 2727046..2728224 (+) 1179 WP_220559061.1 RNA-guided endonuclease TnpB family protein -
  ACKE5C_RS14325 (ACKE5C_14325) - 2728379..2728702 (-) 324 WP_220559062.1 hypothetical protein -
  ACKE5C_RS14330 (ACKE5C_14330) - 2728912..2729184 (-) 273 WP_220561029.1 MFS transporter -
  ACKE5C_RS14335 (ACKE5C_14335) - 2729909..2730112 (+) 204 WP_327875087.1 hypothetical protein -
  ACKE5C_RS14340 (ACKE5C_14340) - 2730250..2730441 (+) 192 WP_327860210.1 hypothetical protein -
  ACKE5C_RS14345 (ACKE5C_14345) - 2730736..2730939 (-) 204 Protein_2730 RNA polymerase subunit sigma-70 -
  ACKE5C_RS14350 (ACKE5C_14350) - 2731055..2731744 (-) 690 WP_057897997.1 LrgB family protein -
  ACKE5C_RS14355 (ACKE5C_14355) - 2731737..2732123 (-) 387 WP_139184918.1 CidA/LrgA family protein -
  ACKE5C_RS14360 (ACKE5C_14360) yhfH 2732350..2732475 (-) 126 WP_082705893.1 protein YhfH -
  ACKE5C_RS14365 (ACKE5C_14365) aceA 2732572..2733852 (-) 1281 WP_057897995.1 isocitrate lyase -
  ACKE5C_RS14370 (ACKE5C_14370) aceB 2733876..2735477 (-) 1602 WP_057897994.1 malate synthase A -
  ACKE5C_RS14375 (ACKE5C_14375) - 2735841..2736638 (-) 798 WP_236781964.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
  ACKE5C_RS14380 (ACKE5C_14380) - 2736793..2737944 (-) 1152 WP_091260124.1 toxic anion resistance protein -
  ACKE5C_RS14385 (ACKE5C_14385) - 2738234..2739418 (+) 1185 WP_408863251.1 DUF1343 domain-containing protein -
  ACKE5C_RS14390 (ACKE5C_14390) - 2739426..2739959 (-) 534 Protein_2739 CocE/NonD family hydrolase -
  ACKE5C_RS14395 (ACKE5C_14395) - 2740037..2741512 (-) 1476 WP_091260122.1 sodium:solute symporter -
  ACKE5C_RS14400 (ACKE5C_14400) - 2741509..2741697 (-) 189 WP_057897989.1 DUF3311 domain-containing protein -
  ACKE5C_RS14405 (ACKE5C_14405) - 2741937..2743022 (-) 1086 WP_057897988.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
  ACKE5C_RS14410 (ACKE5C_14410) - 2743283..2744647 (+) 1365 WP_057897987.1 sigma-54-dependent Fis family transcriptional regulator -
  ACKE5C_RS14415 (ACKE5C_14415) - 2744777..2745886 (-) 1110 WP_281423699.1 tartrate dehydrogenase -
  ACKE5C_RS14420 (ACKE5C_14420) - 2745957..2747378 (-) 1422 WP_246615646.1 aldehyde dehydrogenase family protein -
  ACKE5C_RS14425 (ACKE5C_14425) - 2748131..2749486 (-) 1356 WP_057897983.1 class I adenylate-forming enzyme family protein -
  ACKE5C_RS14430 (ACKE5C_14430) - 2749512..2750660 (-) 1149 WP_057897982.1 hypothetical protein -
  ACKE5C_RS14435 (ACKE5C_14435) - 2750735..2751304 (-) 570 WP_057897981.1 hypothetical protein -
  ACKE5C_RS14440 (ACKE5C_14440) - 2751337..2752299 (-) 963 WP_220559065.1 hypothetical protein -
  ACKE5C_RS14445 (ACKE5C_14445) - 2752372..2754084 (-) 1713 WP_091260117.1 thiamine pyrophosphate-binding protein -
  ACKE5C_RS14450 (ACKE5C_14450) - 2754119..2755309 (-) 1191 WP_057897978.1 aldehyde dehydrogenase family protein -
  ACKE5C_RS14455 (ACKE5C_14455) - 2755349..2756464 (-) 1116 WP_057897977.1 aminoacyl--tRNA ligase-related protein -
  ACKE5C_RS14460 (ACKE5C_14460) - 2756464..2756727 (-) 264 WP_057897976.1 acyl carrier protein -
  ACKE5C_RS14465 (ACKE5C_14465) - 2756746..2757753 (-) 1008 WP_057897975.1 MupA/Atu3671 family FMN-dependent luciferase-like monooxygenase -
  ACKE5C_RS14470 (ACKE5C_14470) - 2757779..2758591 (-) 813 WP_057897974.1 ABC transporter permease -
  ACKE5C_RS14475 (ACKE5C_14475) - 2758594..2759415 (-) 822 WP_091260115.1 ABC-2 family transporter protein -
  ACKE5C_RS14480 (ACKE5C_14480) - 2759393..2760394 (-) 1002 WP_057897972.1 ATP-binding cassette domain-containing protein -
  ACKE5C_RS14485 (ACKE5C_14485) - 2760465..2761598 (-) 1134 WP_220559066.1 beta-ketoacyl synthase N-terminal-like domain-containing protein -
  ACKE5C_RS14490 (ACKE5C_14490) - 2761611..2762357 (-) 747 WP_057897970.1 hypothetical protein -
  ACKE5C_RS14495 (ACKE5C_14495) - 2762889..2763218 (+) 330 WP_057897969.1 hypothetical protein -
  ACKE5C_RS14500 (ACKE5C_14500) - 2763835..2764176 (+) 342 WP_057897968.1 PadR family transcriptional regulator -
  ACKE5C_RS14505 (ACKE5C_14505) - 2764214..2764834 (+) 621 WP_162264999.1 DUF1129 family protein -
  ACKE5C_RS14510 (ACKE5C_14510) - 2765015..2765233 (+) 219 WP_062731146.1 transposase -
  ACKE5C_RS14515 (ACKE5C_14515) - 2765578..2765946 (+) 369 WP_057897966.1 hypothetical protein -
  ACKE5C_RS14520 (ACKE5C_14520) - 2766373..2766609 (-) 237 WP_220559067.1 hypothetical protein -
  ACKE5C_RS14525 (ACKE5C_14525) - 2766630..2767070 (-) 441 WP_057897964.1 PaaI family thioesterase -
  ACKE5C_RS14530 (ACKE5C_14530) - 2767165..2767578 (-) 414 WP_220559068.1 MerR family DNA-binding transcriptional regulator -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35271.77 Da        Isoelectric Point: 10.1013

>NTDB_id=1077991 ACKE5C_RS14290 WP_057900457.1 2722070..2723023(-) (ceuB) [Aneurinibacillus thermoaerophilus strain AFn2]
MKKRYLFITLIVLSFISIFIGVKDISPLDIFDLTDDKAQILLVSRLPRLISIIIAGVSMSICGLIMQQLSRNKFVSPTTA
GTMDSARLGILVSLMIFTTASPLQKMLVAFIFALLGTFLFMKILEKIKFKDTIFIPLVGLMFGNIISSISTFFAYKYDLI
QNMSSWLQGDFSMIMKGRYELLYISIPLLIIAYVFANKFTVAGMGEDFSKNLGLNYKQVVNIGLIIVALMTSSVVLTVGM
IPFLGLIIPNIVTIYRGDHLKKSLSHTALLGAVFVLFCDILGRIVIYPYEISISLTVGIIGSGIFVYLLMRRKAYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1077991 ACKE5C_RS14290 WP_057900457.1 2722070..2723023(-) (ceuB) [Aneurinibacillus thermoaerophilus strain AFn2]
ATGAAAAAAAGATATTTATTTATTACACTCATTGTTTTGTCATTCATTTCTATTTTTATTGGTGTAAAAGATATATCACC
TTTAGATATTTTTGATTTGACGGACGATAAAGCTCAAATTTTATTGGTAAGCAGGCTTCCTCGTCTTATTAGCATTATTA
TTGCCGGCGTAAGTATGAGTATATGCGGCTTAATTATGCAACAGCTAAGCAGGAATAAGTTCGTATCTCCGACTACGGCT
GGAACGATGGATTCCGCCAGATTAGGAATTTTGGTTTCCTTAATGATATTCACGACGGCGAGTCCTTTGCAAAAGATGCT
CGTTGCTTTTATCTTTGCGTTGCTTGGAACGTTTCTGTTTATGAAAATTTTAGAGAAGATAAAATTCAAAGATACTATTT
TCATACCGTTGGTAGGATTGATGTTTGGTAATATTATCAGCTCCATATCGACTTTTTTTGCTTACAAGTATGATTTAATT
CAGAATATGTCTTCATGGTTACAAGGTGATTTTTCAATGATTATGAAAGGCCGATATGAGCTTTTGTATATTAGTATTCC
TTTGCTCATCATCGCCTATGTTTTTGCCAATAAATTTACTGTAGCAGGAATGGGCGAGGATTTTTCAAAAAATTTGGGGC
TGAACTATAAGCAAGTGGTAAATATAGGATTGATTATTGTAGCCTTAATGACATCTTCAGTAGTACTGACAGTAGGGATG
ATTCCTTTTCTAGGCCTTATTATCCCGAACATTGTCACGATATACCGAGGCGATCATTTGAAAAAAAGTCTTTCTCATAC
AGCTTTATTAGGGGCGGTATTTGTCCTGTTCTGTGACATACTCGGTCGTATCGTTATCTATCCGTACGAGATTTCAATCA
GTCTTACAGTTGGAATCATAGGAAGTGGTATTTTTGTTTATCTACTGATGAGGAGAAAGGCATATGGGTTATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1G7YFC1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.7

96.845

0.539


Multiple sequence alignment