Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACJYJG_RS06960 | Genome accession | NZ_CP175536 |
| Coordinates | 1509106..1509525 (+) | Length | 139 a.a. |
| NCBI ID | WP_113051832.1 | Uniprot ID | A0A329R6N3 |
| Organism | Paenibacillus taichungensis strain BB507 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1504106..1514525
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJYJG_RS06935 (ACJYJG_06935) | groL | 1504372..1506003 (+) | 1632 | WP_113051828.1 | chaperonin GroEL | - |
| ACJYJG_RS06940 (ACJYJG_06940) | - | 1506120..1506356 (+) | 237 | WP_408894316.1 | hypothetical protein | - |
| ACJYJG_RS06945 (ACJYJG_06945) | - | 1506564..1507607 (+) | 1044 | WP_408894317.1 | flavin-containing monooxygenase | - |
| ACJYJG_RS06950 (ACJYJG_06950) | - | 1507728..1508327 (-) | 600 | WP_181586458.1 | hypothetical protein | - |
| ACJYJG_RS06955 (ACJYJG_06955) | - | 1508614..1508877 (-) | 264 | WP_397333620.1 | DUF2642 domain-containing protein | - |
| ACJYJG_RS06960 (ACJYJG_06960) | nucA/comI | 1509106..1509525 (+) | 420 | WP_113051832.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ACJYJG_RS06965 (ACJYJG_06965) | - | 1509583..1510167 (-) | 585 | WP_315794853.1 | helix-turn-helix domain-containing protein | - |
| ACJYJG_RS06970 (ACJYJG_06970) | - | 1510471..1511535 (+) | 1065 | WP_113051834.1 | LLM class flavin-dependent oxidoreductase | - |
| ACJYJG_RS06975 (ACJYJG_06975) | - | 1511564..1512532 (+) | 969 | WP_408894318.1 | alpha/beta hydrolase fold domain-containing protein | - |
| ACJYJG_RS06980 (ACJYJG_06980) | - | 1512754..1513665 (+) | 912 | WP_408894319.1 | helix-turn-helix domain-containing protein | - |
| ACJYJG_RS06985 (ACJYJG_06985) | - | 1513692..1514180 (+) | 489 | WP_408894320.1 | DinB family protein | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15130.14 Da Isoelectric Point: 7.7376
>NTDB_id=1077945 ACJYJG_RS06960 WP_113051832.1 1509106..1509525(+) (nucA/comI) [Paenibacillus taichungensis strain BB507]
MVKKWCMLVLILVMALSGSVYVQPSSTVQGAATTYTLTFPMDRYPETGAHIRDAIAAGHSAVCTIDRDGADANRRESLKG
YPTKAGYDRDEWPMAMCEEGGAGADIRYISPSDNRGAGSWVGNQLEKYSNGTRVKFTVK
MVKKWCMLVLILVMALSGSVYVQPSSTVQGAATTYTLTFPMDRYPETGAHIRDAIAAGHSAVCTIDRDGADANRRESLKG
YPTKAGYDRDEWPMAMCEEGGAGADIRYISPSDNRGAGSWVGNQLEKYSNGTRVKFTVK
Nucleotide
Download Length: 420 bp
>NTDB_id=1077945 ACJYJG_RS06960 WP_113051832.1 1509106..1509525(+) (nucA/comI) [Paenibacillus taichungensis strain BB507]
ATGGTTAAGAAGTGGTGTATGCTTGTCCTTATTCTTGTTATGGCTTTATCTGGGAGTGTATATGTGCAGCCCTCTTCGAC
AGTCCAAGGTGCTGCGACCACGTATACGTTGACCTTCCCGATGGATCGTTACCCGGAAACAGGAGCGCATATCCGTGACG
CCATTGCAGCAGGGCATTCGGCAGTGTGTACCATTGACCGGGATGGGGCGGATGCCAATCGCAGGGAGTCGCTGAAAGGC
TATCCGACCAAAGCGGGTTATGATCGGGATGAATGGCCGATGGCGATGTGTGAAGAAGGTGGCGCCGGCGCGGATATTAG
ATACATAAGTCCAAGTGATAACAGGGGGGCTGGATCTTGGGTGGGAAATCAGTTGGAAAAATATTCAAATGGGACAAGGG
TCAAGTTTACAGTGAAATGA
ATGGTTAAGAAGTGGTGTATGCTTGTCCTTATTCTTGTTATGGCTTTATCTGGGAGTGTATATGTGCAGCCCTCTTCGAC
AGTCCAAGGTGCTGCGACCACGTATACGTTGACCTTCCCGATGGATCGTTACCCGGAAACAGGAGCGCATATCCGTGACG
CCATTGCAGCAGGGCATTCGGCAGTGTGTACCATTGACCGGGATGGGGCGGATGCCAATCGCAGGGAGTCGCTGAAAGGC
TATCCGACCAAAGCGGGTTATGATCGGGATGAATGGCCGATGGCGATGTGTGAAGAAGGTGGCGCCGGCGCGGATATTAG
ATACATAAGTCCAAGTGATAACAGGGGGGCTGGATCTTGGGTGGGAAATCAGTTGGAAAAATATTCAAATGGGACAAGGG
TCAAGTTTACAGTGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.871 |
89.209 |
0.525 |