Detailed information NTG1077936

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACJZU6_RS13950
• Genome accession: NZ_CP175534
• Coordinates: 2968669..2972046 (+)
• Length: 1125 a.a.
• NCBI ID: WP_408900456.1
• Uniprot ID: -
• Organism: Photobacterium piscicola strain WVL24019
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2963669..2977046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJZU6_RS13935 (ACJZU6_13935)	hemL	2964494..2965798 (+)	1305	WP_080158511.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACJZU6_RS13940 (ACJZU6_13940)	-	2966138..2967223 (+)	1086	WP_080158512.1	AI-2E family transporter	-
ACJZU6_RS13945 (ACJZU6_13945)	rsmC	2967379..2968398 (+)	1020	WP_408900455.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACJZU6_RS13950 (ACJZU6_13950)	chiS	2968669..2972046 (+)	3378	WP_408900456.1	response regulator	Regulator
ACJZU6_RS13955 (ACJZU6_13955)	-	2972566..2972763 (+)	198	WP_080158514.1	hypothetical protein	-
ACJZU6_RS13960 (ACJZU6_13960)	-	2972793..2974469 (+)	1677	WP_080158515.1	ABC transporter substrate-binding protein	-
ACJZU6_RS13965 (ACJZU6_13965)	-	2974616..2975602 (+)	987	WP_107276894.1	ABC transporter permease	-
ACJZU6_RS13970 (ACJZU6_13970)	-	2975605..2976633 (+)	1029	WP_080158517.1	ABC transporter permease	-

Sequence

Protein

• Length: 1125 a.a.
• Molecular weight: 127021.98 Da
• Isoelectric Point: 6.6890

>NTDB_id=1077936 ACJZU6_RS13950 WP_408900456.1 2968669..2972046(+) (chiS) [Photobacterium piscicola strain WVL24019]
MQNTKRFKRLQHTLMLAFLVLSITPLILSALYFLNSHTKDLAEQSISHLASLRDNKQKQLQSFFAAKESEVKSFARSELS
NNSGGRFYGLVGAFHQLGNIDSQLDAQGRAHYFNSTLTTKSDQTANSGYLGHERYRLMFKRYNAVYNEYLKRSDFKDIML
VDISGDVVYSVKNHNLFGVNLLAKKTSHSALQQTFKAIKEKTQQSPNNPEQVPVVFTDFSANSHSNETTAWFAAPIIQQG
YLHSYVFMELSNQKITELIKDNTKHIQTLLVGTDHKLRFETQPKLPIQLQSQSIDQALAGKSGIGSFINYDNIPVLGAFS
PLNILDHHWALVVELPEKEAFARIFELEKIFVAAMVTAIILVIISSHWLSNSITAPLLRLTWAAEKASGGDLEQKIDGTE
RHDEIGRLAISFARMQRSIREKIGLIRQQNKELEHNLTIIRQQNNELQTADKMKDEFLATTSHELRTPLHGMVGIAESLL
AGANGALHQSQRRQLEMIINSGQRLTTLVDDLLDYHKMRYGDLDINHQAVDMSVAIRLVLELSSHLLGNKPIRIINQIPT
DLPLVDADEQRLEQVLYNLVGNAIKYTSEGKIILSATILEHQLRIQVVDTGQGIPSEQLEHIFEPLIQANTGSANYRQGA
GLGLSISRQLIELMGGRLYVSSQPMVGTTFSFTLNLANANQIAAMAANPNKNHFKAPLLNMANYDASDLPENPDGELLLV
VDDEPVNLQILTNFLRLAGYRVQTAESGPQALALITEQQPDLVLLDIMMPEMSGYEVCNKLRKTHSMLALPIIMLSALGQ
VQDRLKGFECGANDYLTKPFNKEELIARIRAYLQAGKTEIERQKNQALEQEIHRREQVEIGLIETQSRLLGLLDSTNEAI
ICVQHEGRIRYANSAAGKLFKRTPELLERYTIDDILATPLPAAVTDNHHFNGQLSYYIGDHKQQLMTDVINLPIESGLKQ
MFVFDSQGPSADHRINLLENAIDVLSEFAFNGDKNNLQQLRELGGEFTRLADKLGDGDHNKAEIIRQLLVDAMKATLVFW
EQESRKSKFELAEESGLWRVYLDHSTLQTRTLDKYLQLETLPKTPRWRTVINTIDFVLERCPQSNTYRQELVIMRDKLHH
IISHN

Nucleotide

• Length: 3378 bp

>NTDB_id=1077936 ACJZU6_RS13950 WP_408900456.1 2968669..2972046(+) (chiS) [Photobacterium piscicola strain WVL24019]
ATGCAGAATACTAAACGCTTCAAACGTCTTCAGCACACACTTATGCTGGCATTTTTAGTGCTCAGTATCACCCCATTGAT
ATTGTCAGCTCTTTACTTTCTAAATTCTCACACTAAAGATTTAGCCGAGCAAAGCATCAGCCATCTGGCTTCGTTGCGTG
ATAATAAACAAAAACAATTACAGAGTTTCTTTGCCGCTAAAGAGTCTGAAGTAAAAAGCTTTGCTCGCTCTGAATTATCA
AATAATAGTGGTGGACGATTTTACGGTTTAGTGGGTGCATTCCATCAACTTGGCAATATTGATTCACAACTTGATGCACA
AGGTCGCGCTCATTATTTCAATTCAACCCTTACCACTAAAAGTGATCAAACCGCCAATAGTGGCTACCTTGGACATGAAC
GCTATCGTTTAATGTTTAAACGCTATAATGCCGTTTATAATGAGTATCTTAAACGTTCAGATTTTAAAGATATTATGCTG
GTTGATATCTCTGGTGATGTCGTTTATTCAGTTAAAAACCACAACCTTTTTGGGGTTAATCTATTAGCAAAAAAAACCTC
TCATAGCGCCTTACAGCAAACCTTTAAAGCCATTAAAGAAAAAACCCAGCAAAGCCCTAATAACCCAGAGCAAGTCCCGG
TAGTCTTTACCGACTTTAGTGCTAATAGCCACAGTAATGAAACAACGGCTTGGTTTGCAGCACCAATTATCCAACAAGGC
TACCTACATAGTTATGTCTTTATGGAGCTAAGTAACCAAAAGATAACTGAACTGATTAAAGACAATACTAAGCATATTCA
AACCCTATTAGTCGGCACTGATCATAAATTACGCTTTGAAACTCAGCCGAAATTACCAATACAATTACAAAGCCAAAGCA
TCGATCAAGCACTTGCTGGTAAATCAGGTATTGGTAGCTTTATTAATTACGATAATATTCCTGTATTAGGCGCATTTTCG
CCGCTAAATATATTAGATCACCATTGGGCACTAGTGGTTGAGCTTCCTGAAAAAGAAGCCTTTGCGCGAATCTTTGAATT
AGAAAAAATCTTTGTCGCAGCCATGGTTACCGCCATTATTTTAGTCATCATTTCCTCACATTGGCTGTCAAACTCGATTA
CCGCACCATTATTACGCTTAACGTGGGCGGCAGAAAAAGCCTCTGGTGGTGATTTAGAGCAAAAAATTGATGGTACTGAA
CGTCATGATGAAATTGGACGATTAGCGATCAGCTTTGCCCGTATGCAACGCTCTATTCGCGAGAAAATTGGGCTTATTCG
CCAGCAAAATAAAGAGTTAGAACATAACCTAACCATTATTCGTCAACAAAATAATGAACTCCAAACTGCGGATAAAATGA
AAGACGAATTCCTTGCAACCACCTCGCATGAATTACGCACACCACTGCATGGCATGGTGGGGATTGCTGAATCGTTATTA
GCGGGAGCCAATGGCGCATTACATCAATCACAACGCCGCCAATTAGAAATGATCATTAATAGCGGTCAACGTTTAACCAC
ACTGGTTGATGATCTGCTTGATTACCATAAGATGCGTTATGGCGATCTTGATATTAACCACCAAGCGGTTGATATGTCTG
TAGCTATTCGATTAGTACTGGAATTATCGAGCCATTTATTAGGCAATAAACCGATTCGAATTATTAATCAAATTCCAACG
GATCTACCTCTGGTTGATGCGGACGAACAACGTTTAGAACAAGTGCTATATAACTTAGTGGGCAATGCGATTAAATACAC
CTCTGAAGGTAAAATTATTTTATCGGCTACAATATTAGAACATCAATTACGGATTCAAGTAGTTGATACTGGACAAGGTA
TTCCCAGCGAACAACTCGAGCATATTTTTGAACCGCTTATACAAGCCAATACCGGATCAGCTAATTACCGTCAAGGGGCT
GGGCTTGGGCTATCGATCAGTCGCCAATTGATCGAACTAATGGGTGGACGCTTGTATGTCAGTAGCCAACCAATGGTAGG
AACAACGTTCAGTTTCACTCTCAATTTAGCCAATGCCAATCAAATTGCAGCAATGGCGGCGAATCCCAATAAAAATCATT
TCAAAGCGCCATTACTCAATATGGCAAATTATGATGCGTCTGATTTACCAGAAAATCCAGATGGCGAATTGTTGCTAGTT
GTCGATGATGAACCGGTTAATTTACAAATACTAACCAATTTCTTACGTCTTGCTGGTTATCGAGTTCAAACGGCGGAAAG
TGGCCCTCAAGCGTTAGCATTGATCACTGAACAGCAGCCCGATTTAGTGCTACTTGATATTATGATGCCTGAAATGAGTG
GCTATGAAGTGTGTAATAAATTACGTAAAACACATTCCATGTTAGCGCTGCCCATCATTATGTTGTCAGCCCTGGGGCAA
GTACAAGATCGCCTCAAAGGCTTTGAATGTGGAGCCAATGATTATTTAACCAAACCATTTAATAAAGAAGAACTTATAGC
GAGAATTAGGGCTTATTTACAAGCAGGAAAAACCGAAATTGAGCGCCAGAAAAACCAAGCACTAGAACAGGAAATTCATC
GTCGTGAACAAGTCGAAATTGGACTGATAGAAACCCAAAGTCGTTTACTTGGGCTACTAGATTCAACCAATGAGGCGATC
ATTTGTGTTCAGCACGAAGGTCGAATCCGTTATGCCAACAGTGCTGCGGGCAAACTATTTAAACGCACGCCAGAGCTATT
AGAGCGCTATACCATTGACGATATTCTAGCGACCCCATTGCCAGCAGCTGTCACGGATAATCATCATTTTAATGGTCAAC
TTAGCTATTACATTGGTGACCACAAACAACAATTAATGACCGATGTTATCAATTTACCGATTGAGTCAGGGCTTAAACAA
ATGTTTGTCTTTGATAGCCAAGGACCATCGGCTGATCATCGTATCAACCTACTTGAAAATGCTATTGATGTGTTGTCTGA
ATTTGCCTTTAATGGCGATAAAAATAACCTTCAACAACTGCGAGAGTTAGGAGGAGAATTTACCCGTTTAGCCGACAAAT
TAGGGGATGGTGATCATAATAAAGCTGAAATAATTCGTCAATTATTAGTCGATGCCATGAAAGCAACCTTGGTGTTTTGG
GAACAAGAATCACGTAAAAGTAAATTTGAATTAGCTGAAGAAAGTGGTTTATGGCGTGTTTATTTAGACCATAGTACGCT
TCAAACGCGTACCTTAGATAAATATCTTCAACTTGAAACGTTACCAAAAACACCCCGTTGGCGAACTGTCATTAATACCA
TTGATTTTGTATTAGAACGTTGTCCACAATCTAATACCTATCGCCAAGAACTCGTCATTATGCGGGATAAGTTACATCAT
ATCATTAGTCATAACTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (568-677)

• Response regulator receiver domain (Response_reg) (719-830)

• HAMP domain (HAMP) (368-421)

• His Kinase A (phospho-acceptor) domain (HisKA) (453-519)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.903	100	0.572