Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACJVC7_RS15730 Genome accession   NZ_CP174529
Coordinates   3216092..3216688 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain SCNJ1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3211092..3221688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC7_RS15715 helD 3211300..3213354 (-) 2055 WP_004176653.1 DNA helicase IV -
  ACJVC7_RS15720 - 3213479..3213925 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACJVC7_RS15725 yccS 3213943..3216078 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACJVC7_RS15730 sxy/tfoX 3216092..3216688 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACJVC7_RS15735 sulA 3217037..3217546 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACJVC7_RS15740 ompA 3217899..3218969 (+) 1071 WP_002898408.1 porin OmpA -
  ACJVC7_RS15745 matP 3219101..3219553 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACJVC7_RS15750 - 3219739..3221496 (+) 1758 WP_032429922.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1077810 ACJVC7_RS15730 WP_004150836.1 3216092..3216688(-) (sxy/tfoX) [Klebsiella pneumoniae strain SCNJ1]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1077810 ACJVC7_RS15730 WP_004150836.1 3216092..3216688(-) (sxy/tfoX) [Klebsiella pneumoniae strain SCNJ1]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment