Detailed information NTG1077773

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACJ51O_RS15445
• Genome accession: NZ_CP174521
• Coordinates: 3288831..3289985 (+)
• Length: 384 a.a.
• NCBI ID: WP_105393312.1
• Uniprot ID: -
• Organism: Burkholderia pyrrocinia strain DLL-114
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3283831..3294985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ51O_RS15415 (ACJ51O_15415)	-	3284470..3285078 (+)	609	WP_034179070.1	50S ribosomal protein L25/general stress protein Ctc	-
ACJ51O_RS15420 (ACJ51O_15420)	pth	3285199..3285798 (+)	600	WP_034179071.1	aminoacyl-tRNA hydrolase	-
ACJ51O_RS15425 (ACJ51O_15425)	hisC	3285917..3286984 (+)	1068	WP_407970889.1	histidinol-phosphate transaminase	-
ACJ51O_RS15430 (ACJ51O_15430)	-	3287066..3287332 (-)	267	WP_034179073.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACJ51O_RS15435 (ACJ51O_15435)	coaD	3287392..3287889 (-)	498	WP_031403077.1	pantetheine-phosphate adenylyltransferase	-
ACJ51O_RS15440 (ACJ51O_15440)	rsmD	3288001..3288615 (-)	615	WP_034179074.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACJ51O_RS15445 (ACJ51O_15445)	pilA	3288831..3289985 (+)	1155	WP_105393312.1	signal recognition particle-docking protein FtsY	Machinery gene
ACJ51O_RS15450 (ACJ51O_15450)	maiA	3290057..3290701 (-)	645	WP_034179437.1	maleylacetoacetate isomerase	-
ACJ51O_RS15455 (ACJ51O_15455)	ybiB	3290895..3291869 (+)	975	WP_217590804.1	DNA-binding protein YbiB	-
ACJ51O_RS15460 (ACJ51O_15460)	leuA	3292250..3293899 (+)	1650	WP_407970890.1	2-isopropylmalate synthase	-
ACJ51O_RS15465 (ACJ51O_15465)	-	3294031..3294414 (-)	384	WP_262536611.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 41085.03 Da
• Isoelectric Point: 4.8057

>NTDB_id=1077773 ACJ51O_RS15445 WP_105393312.1 3288831..3289985(+) (pilA) [Burkholderia pyrrocinia strain DLL-114]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPVLEAPPAADVPQAPVQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDASAKKSWLARLKTGLAKTGNSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRTGRLTDPQQVKG
ALHDLLVELLKPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGSPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=1077773 ACJ51O_RS15445 WP_105393312.1 3288831..3289985(+) (pilA) [Burkholderia pyrrocinia strain DLL-114]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCCGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAGCCGTCCGATGCGCCCGTGCTCGAGGCTCCGCCCGCGGCCGACGTGCCGCAGGCGCCCGTGCAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCATCCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAAACGGGCAACAGCATCACCGG
CGTATTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAACTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGACGCACTGCGCGAAAAGGTACGCACCGGCCGGCTGACCGACCCGCAGCAGGTGAAGGGT
GCGCTGCACGACCTGCTCGTCGAGCTGCTGAAGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCCCTCGTGAT
GATGATCACCGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGTGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCACGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCTCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTGAAGGCATTCGACGACGCGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCCGCGATCGCGCGGCAGCGCCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGTTCA
GCGCCGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (185-384)

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.957	100	0.586