Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACJED4_RS16915 Genome accession   NZ_CP174518
Coordinates   3260083..3261033 (-) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain G03     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3255083..3266033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED4_RS16885 - 3255358..3255720 (+) 363 WP_017360224.1 hypothetical protein -
  ACJED4_RS16890 - 3255807..3256241 (+) 435 WP_008348634.1 hypothetical protein -
  ACJED4_RS16895 - 3256276..3257232 (-) 957 WP_048001719.1 LCP family protein -
  ACJED4_RS16900 - 3257424..3258368 (-) 945 WP_165378811.1 siderophore ABC transporter substrate-binding protein -
  ACJED4_RS16905 - 3258391..3259149 (-) 759 WP_268450117.1 ABC transporter ATP-binding protein -
  ACJED4_RS16910 - 3259140..3260090 (-) 951 WP_144740683.1 iron chelate uptake ABC transporter family permease subunit -
  ACJED4_RS16915 ceuB 3260083..3261033 (-) 951 WP_017366964.1 ABC transporter permease Machinery gene
  ACJED4_RS16920 - 3261192..3261470 (-) 279 WP_335372499.1 barstar family protein -
  ACJED4_RS16925 - 3261533..3262702 (-) 1170 WP_407968871.1 MFS transporter -
  ACJED4_RS16930 - 3262846..3264285 (+) 1440 WP_407968872.1 PLP-dependent aminotransferase family protein -
  ACJED4_RS16935 - 3264316..3264798 (-) 483 WP_007499155.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=1077678 ACJED4_RS16915 WP_017366964.1 3260083..3261033(-) (ceuB) [Bacillus altitudinis strain G03]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1077678 ACJED4_RS16915 WP_017366964.1 3260083..3261033(-) (ceuB) [Bacillus altitudinis strain G03]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment