Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACJED4_RS16525 Genome accession   NZ_CP174518
Coordinates   3179599..3179796 (-) Length   65 a.a.
NCBI ID   WP_366963355.1    Uniprot ID   -
Organism   Bacillus altitudinis strain G03     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3174599..3184796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED4_RS16500 - 3174769..3175749 (-) 981 WP_035392443.1 ABC transporter ATP-binding protein -
  ACJED4_RS16505 - 3175920..3176714 (-) 795 WP_353829748.1 DUF2268 domain-containing putative Zn-dependent protease -
  ACJED4_RS16510 fabF 3176792..3178033 (-) 1242 WP_060780964.1 beta-ketoacyl-ACP synthase II -
  ACJED4_RS16515 - 3178055..3178993 (-) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  ACJED4_RS16520 - 3179163..3179396 (+) 234 WP_008348506.1 hypothetical protein -
  ACJED4_RS16525 comZ 3179599..3179796 (-) 198 WP_366963355.1 ComZ family protein Regulator
  ACJED4_RS16530 med 3179808..3180773 (-) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  ACJED4_RS16535 - 3180864..3181439 (-) 576 WP_366963295.1 nad binding enzyme -
  ACJED4_RS16540 - 3181515..3182255 (-) 741 WP_007499048.1 hypothetical protein -
  ACJED4_RS16545 - 3182468..3182662 (+) 195 WP_024720055.1 YjzD family protein -
  ACJED4_RS16550 - 3182782..3184047 (-) 1266 WP_148780243.1 MFS transporter -
  ACJED4_RS16555 - 3184217..3184396 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7300.34 Da        Isoelectric Point: 4.3178

>NTDB_id=1077674 ACJED4_RS16525 WP_366963355.1 3179599..3179796(-) (comZ) [Bacillus altitudinis strain G03]
MQHEKSLEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=1077674 ACJED4_RS16525 WP_366963355.1 3179599..3179796(-) (comZ) [Bacillus altitudinis strain G03]
ATGCAGCACGAAAAATCGCTGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCACTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment