Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACJED4_RS15180 Genome accession   NZ_CP174518
Coordinates   2934723..2935304 (-) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain G03     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2929723..2940304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED4_RS15150 - 2929755..2930246 (-) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -
  ACJED4_RS15155 mobB 2930239..2930766 (-) 528 WP_046527034.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACJED4_RS15160 glp 2930748..2932022 (-) 1275 WP_048001602.1 gephyrin-like molybdotransferase Glp -
  ACJED4_RS15165 - 2932032..2933048 (-) 1017 WP_050827223.1 MoeB/ThiF family adenylyltransferase -
  ACJED4_RS15170 - 2933078..2933659 (-) 582 WP_017359414.1 molybdenum cofactor guanylyltransferase -
  ACJED4_RS15175 - 2933743..2934660 (+) 918 WP_283931315.1 sigmaE regulated sporulation protein -
  ACJED4_RS15180 rok 2934723..2935304 (-) 582 WP_007498648.1 hypothetical protein Regulator
  ACJED4_RS15185 - 2935786..2936244 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  ACJED4_RS15190 ahpA 2936521..2937063 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  ACJED4_RS15195 - 2937335..2938144 (+) 810 WP_058337402.1 mechanosensitive ion channel family protein -
  ACJED4_RS15200 - 2938167..2938409 (-) 243 WP_003211408.1 YkuS family protein -
  ACJED4_RS15205 - 2938460..2939638 (-) 1179 WP_046527697.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=1077665 ACJED4_RS15180 WP_007498648.1 2934723..2935304(-) (rok) [Bacillus altitudinis strain G03]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1077665 ACJED4_RS15180 WP_007498648.1 2934723..2935304(-) (rok) [Bacillus altitudinis strain G03]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment