Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   ACJED4_RS11050 Genome accession   NZ_CP174518
Coordinates   2129307..2130110 (+) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain G03     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2124307..2135110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED4_RS11035 ahrC 2125330..2125779 (+) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  ACJED4_RS11040 recN 2125814..2127547 (+) 1734 WP_035390783.1 DNA repair protein RecN Machinery gene
  ACJED4_RS11045 spoIVB 2127746..2129023 (+) 1278 WP_017367575.1 SpoIVB peptidase -
  ACJED4_RS11050 spo0A 2129307..2130110 (+) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  ACJED4_RS11055 - 2130561..2131661 (+) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  ACJED4_RS11060 - 2131888..2132625 (+) 738 WP_035390781.1 glycerophosphodiester phosphodiesterase -
  ACJED4_RS11065 - 2132659..2132895 (-) 237 WP_017357960.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=1077657 ACJED4_RS11050 WP_008342226.1 2129307..2130110(+) (spo0A) [Bacillus altitudinis strain G03]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1077657 ACJED4_RS11050 WP_008342226.1 2129307..2130110(+) (spo0A) [Bacillus altitudinis strain G03]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment