Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACJROX_RS10440 Genome accession   NZ_CP174509
Coordinates   2005546..2005734 (+) Length   62 a.a.
NCBI ID   WP_408010698.1    Uniprot ID   -
Organism   Pseudalkalibacillus sp. A8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2000546..2010734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJROX_RS10415 (ACJROX_10415) - 2001128..2001850 (+) 723 WP_408010693.1 amino acid ABC transporter ATP-binding protein -
  ACJROX_RS10420 (ACJROX_10420) - 2002318..2002497 (-) 180 WP_408010694.1 YjzD family protein -
  ACJROX_RS10425 (ACJROX_10425) - 2002773..2003516 (+) 744 WP_408010695.1 alpha/beta hydrolase -
  ACJROX_RS10430 (ACJROX_10430) - 2003736..2004440 (+) 705 WP_408010696.1 NAD-dependent epimerase/dehydratase family protein -
  ACJROX_RS10435 (ACJROX_10435) - 2004571..2005524 (+) 954 WP_408010697.1 BMP family ABC transporter substrate-binding protein -
  ACJROX_RS10440 (ACJROX_10440) comZ 2005546..2005734 (+) 189 WP_408010698.1 ComZ family protein Regulator
  ACJROX_RS10445 (ACJROX_10445) - 2005952..2006887 (+) 936 WP_408010699.1 beta-ketoacyl-ACP synthase III -
  ACJROX_RS10450 (ACJROX_10450) fabF 2006912..2008150 (+) 1239 WP_408010700.1 beta-ketoacyl-ACP synthase II -
  ACJROX_RS10455 (ACJROX_10455) - 2008356..2008577 (+) 222 WP_408010701.1 hypothetical protein -
  ACJROX_RS10460 (ACJROX_10460) - 2008692..2009441 (+) 750 WP_408010702.1 YjbA family protein -
  ACJROX_RS10465 (ACJROX_10465) tnpA 2009668..2010066 (+) 399 WP_408006922.1 IS200/IS605 family transposase -
  ACJROX_RS10470 (ACJROX_10470) - 2010167..2010361 (-) 195 WP_408011849.1 hypothetical protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7218.38 Da        Isoelectric Point: 4.2259

>NTDB_id=1077533 ACJROX_RS10440 WP_408010698.1 2005546..2005734(+) (comZ) [Pseudalkalibacillus sp. A8]
MDQERSMKFMQIAMTHLPEAKQMMEEKGVELSMEDIQPIVNILMNVMNDAYELGRIEASENK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1077533 ACJROX_RS10440 WP_408010698.1 2005546..2005734(+) (comZ) [Pseudalkalibacillus sp. A8]
ATGGACCAAGAAAGAAGTATGAAGTTCATGCAAATCGCGATGACTCATTTGCCGGAAGCAAAGCAAATGATGGAGGAAAA
AGGTGTAGAATTATCAATGGAAGACATTCAACCTATCGTAAACATCCTTATGAATGTAATGAATGATGCCTACGAATTAG
GAAGAATTGAAGCATCCGAAAATAAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

55.172

93.548

0.516

Multiple sequence alignment