Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ACI5QO_RS09865 Genome accession   NZ_CP174495
Coordinates   2102812..2104485 (-) Length   557 a.a.
NCBI ID   WP_002394342.1    Uniprot ID   A0A125WAC2
Organism   Enterococcus faecalis strain Ms-MYP-47     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2097812..2109485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI5QO_RS09835 (ACI5QO_01939) ftsL 2098827..2099234 (-) 408 WP_002385090.1 cell division protein FtsL -
  ACI5QO_RS09840 (ACI5QO_01940) rsmH 2099251..2100207 (-) 957 WP_202229869.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  ACI5QO_RS09845 (ACI5QO_01941) mraZ 2100222..2100707 (-) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  ACI5QO_RS09850 (ACI5QO_01942) - 2100941..2101333 (-) 393 WP_002383401.1 DUF3397 domain-containing protein -
  ACI5QO_RS09855 (ACI5QO_01943) - 2101578..2102543 (+) 966 WP_202229691.1 magnesium transporter CorA family protein -
  ACI5QO_RS09860 (ACI5QO_01944) - 2102611..2102721 (+) 111 WP_002383399.1 DUF4044 domain-containing protein -
  ACI5QO_RS09865 (ACI5QO_01945) recN 2102812..2104485 (-) 1674 WP_002394342.1 DNA repair protein RecN Machinery gene
  ACI5QO_RS09870 (ACI5QO_01946) - 2104503..2104952 (-) 450 WP_002358881.1 arginine repressor -
  ACI5QO_RS09875 (ACI5QO_01947) - 2105084..2105944 (-) 861 WP_010706683.1 hypothetical protein -
  ACI5QO_RS09880 - 2105949..2106302 (-) 354 WP_228550913.1 matrixin family metalloprotease -
  ACI5QO_RS09885 (ACI5QO_01949) - 2106873..2107688 (-) 816 WP_002355880.1 TlyA family RNA methyltransferase -
  ACI5QO_RS09890 (ACI5QO_01950) - 2107702..2108583 (-) 882 WP_002355879.1 polyprenyl synthetase family protein -
  ACI5QO_RS09895 (ACI5QO_01951) - 2108583..2108813 (-) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62627.05 Da        Isoelectric Point: 4.5772

>NTDB_id=1077320 ACI5QO_RS09865 WP_002394342.1 2102812..2104485(-) (recN) [Enterococcus faecalis strain Ms-MYP-47]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKKLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=1077320 ACI5QO_RS09865 WP_002394342.1 2102812..2104485(-) (recN) [Enterococcus faecalis strain Ms-MYP-47]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGCTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGTGGATCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGAAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGCTGATTGATGGCTTAG
AACTAGACGAAGGTCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGCGATTCA
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCCGCTCATCAACAAGCGTTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTTGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTAGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTTAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A125WAC2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501

Multiple sequence alignment