Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACJJV3_RS04690 Genome accession   NZ_CP174478
Coordinates   907579..908184 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Infantis strain Z1324PSL0001     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 902579..913184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJJV3_RS04675 helD 902796..904850 (-) 2055 WP_023993506.1 DNA helicase IV -
  ACJJV3_RS04680 - 904974..905420 (+) 447 WP_023993507.1 YccF domain-containing protein -
  ACJJV3_RS04685 yccS 905439..907592 (+) 2154 WP_000950876.1 YccS family putative transporter -
  ACJJV3_RS04690 sxy/tfoX 907579..908184 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACJJV3_RS04695 sulA 908401..908910 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  ACJJV3_RS04700 ompA 909267..910319 (+) 1053 WP_001670727.1 porin OmpA -
  ACJJV3_RS04705 matP 910391..910843 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ACJJV3_RS04710 - 911029..912789 (+) 1761 WP_000156457.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1077270 ACJJV3_RS04690 WP_001202375.1 907579..908184(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain Z1324PSL0001]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1077270 ACJJV3_RS04690 WP_001202375.1 907579..908184(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain Z1324PSL0001]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751

Multiple sequence alignment