Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACJMCD_RS16425 | Genome accession | NZ_CP174470 |
| Coordinates | 3171646..3172068 (+) | Length | 140 a.a. |
| NCBI ID | WP_013057949.1 | Uniprot ID | A0A8D3X0F8 |
| Organism | Priestia megaterium strain WSY10 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3166646..3177068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJMCD_RS16400 (ACJMCD_16400) | - | 3166977..3167810 (-) | 834 | WP_098288094.1 | AraC family transcriptional regulator | - |
| ACJMCD_RS16405 (ACJMCD_16405) | - | 3168034..3168855 (+) | 822 | WP_053487481.1 | sensor histidine kinase | - |
| ACJMCD_RS16410 (ACJMCD_16410) | - | 3168856..3169497 (+) | 642 | WP_057273553.1 | response regulator transcription factor | - |
| ACJMCD_RS16415 (ACJMCD_16415) | - | 3169629..3171011 (+) | 1383 | WP_029322909.1 | PepSY domain-containing protein | - |
| ACJMCD_RS16420 (ACJMCD_16420) | - | 3171041..3171505 (+) | 465 | WP_029322913.1 | FixH family protein | - |
| ACJMCD_RS16425 (ACJMCD_16425) | nucA/comI | 3171646..3172068 (+) | 423 | WP_013057949.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ACJMCD_RS16430 (ACJMCD_16430) | - | 3172222..3172575 (+) | 354 | WP_223272376.1 | DUF1516 family protein | - |
| ACJMCD_RS16435 (ACJMCD_16435) | - | 3172616..3173209 (-) | 594 | WP_013057951.1 | hypothetical protein | - |
| ACJMCD_RS16440 (ACJMCD_16440) | - | 3173365..3174021 (-) | 657 | WP_029322917.1 | TetR/AcrR family transcriptional regulator | - |
| ACJMCD_RS16445 (ACJMCD_16445) | - | 3174045..3175325 (-) | 1281 | WP_228540830.1 | glycosyltransferase | - |
| ACJMCD_RS16450 (ACJMCD_16450) | - | 3175623..3176168 (+) | 546 | WP_064471863.1 | GNAT family N-acetyltransferase | - |
| ACJMCD_RS16455 (ACJMCD_16455) | - | 3176468..3176953 (-) | 486 | WP_029322922.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15329.17 Da Isoelectric Point: 4.4990
>NTDB_id=1077217 ACJMCD_RS16425 WP_013057949.1 3171646..3172068(+) (nucA/comI) [Priestia megaterium strain WSY10]
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
Nucleotide
Download Length: 423 bp
>NTDB_id=1077217 ACJMCD_RS16425 WP_013057949.1 3171646..3172068(+) (nucA/comI) [Priestia megaterium strain WSY10]
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCCGATAT
TGAATATGTAAAGCCTTCAGACAATCGAGGCGCCGGGTCTTGGATCTCACATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCCGATAT
TGAATATGTAAAGCCTTCAGACAATCGAGGCGCCGGGTCTTGGATCTCACATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
61.207 |
82.857 |
0.507 |