Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   ACJMCD_RS16145 Genome accession   NZ_CP174470
Coordinates   3127475..3128425 (-) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain WSY10     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3122475..3133425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJMCD_RS16120 (ACJMCD_16120) - 3123218..3123358 (-) 141 WP_170960213.1 hypothetical protein -
  ACJMCD_RS16125 (ACJMCD_16125) - 3123614..3124468 (-) 855 WP_013057886.1 manganese catalase family protein -
  ACJMCD_RS16130 (ACJMCD_16130) - 3124803..3125759 (-) 957 WP_029322847.1 siderophore ABC transporter substrate-binding protein -
  ACJMCD_RS16135 (ACJMCD_16135) - 3125783..3126541 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  ACJMCD_RS16140 (ACJMCD_16140) - 3126535..3127482 (-) 948 WP_029322849.1 iron chelate uptake ABC transporter family permease subunit -
  ACJMCD_RS16145 (ACJMCD_16145) ceuB 3127475..3128425 (-) 951 WP_013057891.1 ABC transporter permease Machinery gene
  ACJMCD_RS16150 (ACJMCD_16150) - 3128744..3129550 (-) 807 WP_013057892.1 cell wall hydrolase -
  ACJMCD_RS16155 (ACJMCD_16155) - 3129913..3130167 (+) 255 WP_013057893.1 hypothetical protein -
  ACJMCD_RS16160 (ACJMCD_16160) - 3130249..3130413 (-) 165 WP_013057894.1 hypothetical protein -
  ACJMCD_RS16165 (ACJMCD_16165) - 3130731..3131075 (-) 345 WP_013057895.1 hypothetical protein -
  ACJMCD_RS16170 (ACJMCD_16170) - 3131118..3132149 (-) 1032 WP_013057896.1 zinc-binding dehydrogenase -
  ACJMCD_RS16175 (ACJMCD_16175) - 3132155..3133201 (-) 1047 WP_263032912.1 galactitol-1-phosphate 5-dehydrogenase -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=1077216 ACJMCD_RS16145 WP_013057891.1 3127475..3128425(-) (ceuB) [Priestia megaterium strain WSY10]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1077216 ACJMCD_RS16145 WP_013057891.1 3127475..3128425(-) (ceuB) [Priestia megaterium strain WSY10]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTCAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGTGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGGCTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAGGGGAGATATGAACTTTTATACCTTAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACTTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5


Multiple sequence alignment