Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACIU4M_RS16755 Genome accession   NZ_CP174375
Coordinates   3219501..3220082 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain SF5     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3214501..3225082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIU4M_RS16730 (ACIU4M_16730) - 3215167..3216345 (+) 1179 WP_047946370.1 N-acetyldiaminopimelate deacetylase -
  ACIU4M_RS16735 (ACIU4M_16735) - 3216396..3216638 (+) 243 WP_024424725.1 YkuS family protein -
  ACIU4M_RS16740 (ACIU4M_16740) - 3216661..3217470 (-) 810 WP_024719563.1 mechanosensitive ion channel family protein -
  ACIU4M_RS16745 (ACIU4M_16745) ahpA 3217742..3218284 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  ACIU4M_RS16750 (ACIU4M_16750) - 3218561..3219019 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  ACIU4M_RS16755 (ACIU4M_16755) rok 3219501..3220082 (+) 582 WP_007498648.1 hypothetical protein Regulator
  ACIU4M_RS16760 (ACIU4M_16760) - 3220145..3221062 (-) 918 WP_041507373.1 hypothetical protein -
  ACIU4M_RS16765 (ACIU4M_16765) - 3221146..3221727 (+) 582 WP_268356711.1 molybdenum cofactor guanylyltransferase -
  ACIU4M_RS16770 (ACIU4M_16770) - 3221757..3222773 (+) 1017 WP_039168677.1 thiazole biosynthesis adenylyltransferase ThiF -
  ACIU4M_RS16775 (ACIU4M_16775) glp 3222783..3224057 (+) 1275 WP_407708382.1 gephyrin-like molybdotransferase Glp -
  ACIU4M_RS16780 (ACIU4M_16780) mobB 3224039..3224566 (+) 528 WP_039168672.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACIU4M_RS16785 (ACIU4M_16785) - 3224559..3225050 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=1077001 ACIU4M_RS16755 WP_007498648.1 3219501..3220082(+) (rok) [Bacillus altitudinis strain SF5]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1077001 ACIU4M_RS16755 WP_007498648.1 3219501..3220082(+) (rok) [Bacillus altitudinis strain SF5]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment