Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACIU4M_RS15055 Genome accession   NZ_CP174375
Coordinates   2895867..2896817 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain SF5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2890867..2901817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIU4M_RS15035 (ACIU4M_15035) - 2892106..2892588 (+) 483 WP_008348662.1 hypothetical protein -
  ACIU4M_RS15040 (ACIU4M_15040) - 2892619..2894058 (-) 1440 WP_283933371.1 PLP-dependent aminotransferase family protein -
  ACIU4M_RS15045 (ACIU4M_15045) - 2894201..2895370 (+) 1170 WP_058337508.1 MFS transporter -
  ACIU4M_RS15050 (ACIU4M_15050) - 2895433..2895711 (+) 279 WP_039167440.1 barstar family protein -
  ACIU4M_RS15055 (ACIU4M_15055) ceuB 2895867..2896817 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  ACIU4M_RS15060 (ACIU4M_15060) - 2896810..2897760 (+) 951 WP_407708323.1 iron chelate uptake ABC transporter family permease subunit -
  ACIU4M_RS15065 (ACIU4M_15065) - 2897751..2898509 (+) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  ACIU4M_RS15070 (ACIU4M_15070) - 2898532..2899476 (+) 945 WP_041507494.1 siderophore ABC transporter substrate-binding protein -
  ACIU4M_RS15075 (ACIU4M_15075) - 2899616..2900572 (+) 957 WP_007499147.1 LCP family protein -
  ACIU4M_RS15080 (ACIU4M_15080) - 2900805..2901239 (-) 435 WP_407708324.1 enoyl-CoA hydratase -
  ACIU4M_RS15085 (ACIU4M_15085) - 2901326..2901688 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=1076988 ACIU4M_RS15055 WP_039167438.1 2895867..2896817(+) (ceuB) [Bacillus altitudinis strain SF5]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1076988 ACIU4M_RS15055 WP_039167438.1 2895867..2896817(+) (ceuB) [Bacillus altitudinis strain SF5]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTAATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment