Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACIU4M_RS10385 | Genome accession | NZ_CP174375 |
| Coordinates | 1954605..1957040 (+) | Length | 811 a.a. |
| NCBI ID | WP_407708142.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain SF5 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1949605..1962040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIU4M_RS10370 (ACIU4M_10370) | - | 1952476..1952940 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| ACIU4M_RS10375 (ACIU4M_10375) | - | 1952955..1953512 (+) | 558 | WP_007496258.1 | UvrB/UvrC motif-containing protein | - |
| ACIU4M_RS10380 (ACIU4M_10380) | - | 1953517..1954608 (+) | 1092 | WP_024718295.1 | protein arginine kinase | - |
| ACIU4M_RS10385 (ACIU4M_10385) | clpC | 1954605..1957040 (+) | 2436 | WP_407708142.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ACIU4M_RS10390 (ACIU4M_10390) | radA | 1957134..1958513 (+) | 1380 | WP_017359160.1 | DNA repair protein RadA | Machinery gene |
| ACIU4M_RS10395 (ACIU4M_10395) | disA | 1958516..1959595 (+) | 1080 | WP_007496267.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ACIU4M_RS10400 (ACIU4M_10400) | - | 1959749..1960849 (+) | 1101 | WP_047946821.1 | PIN/TRAM domain-containing protein | - |
| ACIU4M_RS10405 (ACIU4M_10405) | ispD | 1960863..1961552 (+) | 690 | WP_008345432.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ACIU4M_RS10410 (ACIU4M_10410) | ispF | 1961556..1962032 (+) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90039.79 Da Isoelectric Point: 6.2469
>NTDB_id=1076979 ACIU4M_RS10385 WP_407708142.1 1954605..1957040(+) (clpC) [Bacillus altitudinis strain SF5]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIILDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIILDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=1076979 ACIU4M_RS10385 WP_407708142.1 1954605..1957040(+) (clpC) [Bacillus altitudinis strain SF5]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGTACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAACAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGCAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGGGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAACTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCCGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTGGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTTCTAAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCT
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGCTATGATGAGGGTGGTCAGCTGACTGAAAAGGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGCGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCATATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGTACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAACAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGCAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGGGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAACTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCCGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTGGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTTCTAAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCT
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGCTATGATGAGGGTGGTCAGCTGACTGAAAAGGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGCGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCATATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.931 |
100 |
0.959 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.948 |
87.916 |
0.43 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae D39 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae R6 |
52.558 |
79.531 |
0.418 |