Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACIU4M_RS10055 | Genome accession | NZ_CP174375 |
| Coordinates | 1894801..1895091 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain SF5 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1889801..1900091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIU4M_RS10015 (ACIU4M_10015) | - | 1889834..1890163 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| ACIU4M_RS10020 (ACIU4M_10020) | - | 1890176..1890616 (+) | 441 | WP_008341898.1 | YaaR family protein | - |
| ACIU4M_RS10025 (ACIU4M_10025) | holB | 1890628..1891617 (+) | 990 | WP_407708138.1 | DNA polymerase III subunit delta' | - |
| ACIU4M_RS10030 (ACIU4M_10030) | - | 1891620..1892447 (+) | 828 | WP_024719352.1 | stage 0 sporulation family protein | - |
| ACIU4M_RS10035 (ACIU4M_10035) | yabA | 1892462..1892815 (+) | 354 | WP_007496228.1 | DNA replication initiation control protein YabA | - |
| ACIU4M_RS10040 (ACIU4M_10040) | - | 1892871..1893614 (+) | 744 | WP_017359328.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACIU4M_RS10045 (ACIU4M_10045) | - | 1893601..1893900 (+) | 300 | WP_019744059.1 | GIY-YIG nuclease family protein | - |
| ACIU4M_RS10050 (ACIU4M_10050) | rsmI | 1893875..1894756 (+) | 882 | WP_135009446.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACIU4M_RS10055 (ACIU4M_10055) | abrB | 1894801..1895091 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ACIU4M_RS10060 (ACIU4M_10060) | metG | 1895611..1897611 (+) | 2001 | WP_407708139.1 | methionine--tRNA ligase | - |
| ACIU4M_RS10065 (ACIU4M_10065) | - | 1897693..1898460 (+) | 768 | WP_017359325.1 | TatD family hydrolase | - |
| ACIU4M_RS10070 (ACIU4M_10070) | - | 1898705..1899907 (+) | 1203 | WP_007496219.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=1076978 ACIU4M_RS10055 WP_087975202.1 1894801..1895091(-) (abrB) [Bacillus altitudinis strain SF5]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=1076978 ACIU4M_RS10055 WP_087975202.1 1894801..1895091(-) (abrB) [Bacillus altitudinis strain SF5]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGCCGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |