Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEHT_RS15025 | Genome accession | NZ_CP174243 |
| Coordinates | 3349495..3349809 (+) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF582 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3344495..3354809
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHT_RS15000 (ACJEHT_15000) | yajC | 3344515..3344850 (+) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
| ACJEHT_RS15005 (ACJEHT_15005) | secD | 3344872..3346728 (+) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEHT_RS15010 (ACJEHT_15010) | secF | 3346741..3347658 (+) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEHT_RS15015 (ACJEHT_15015) | - | 3347848..3348189 (-) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEHT_RS15020 (ACJEHT_15020) | hisC | 3348226..3349335 (-) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEHT_RS15025 (ACJEHT_15025) | lpp1978 | 3349495..3349809 (+) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEHT_RS15030 (ACJEHT_15030) | lpp1977 | 3349748..3350554 (+) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEHT_RS15035 (ACJEHT_15035) | lpp1976 | 3350551..3351108 (+) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEHT_RS15040 (ACJEHT_15040) | - | 3351218..3352414 (+) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEHT_RS15045 (ACJEHT_15045) | - | 3352532..3353392 (-) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEHT_RS15050 (ACJEHT_15050) | - | 3353884..3354384 (+) | 501 | WP_129904980.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076449 ACJEHT_RS15025 WP_011215961.1 3349495..3349809(+) (lpp1978) [Legionella pneumophila strain SPF582]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076449 ACJEHT_RS15025 WP_011215961.1 3349495..3349809(+) (lpp1978) [Legionella pneumophila strain SPF582]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |