Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | ACJEHT_RS08900 | Genome accession | NZ_CP174243 |
| Coordinates | 1963425..1964117 (-) | Length | 230 a.a. |
| NCBI ID | WP_011214413.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain SPF582 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1958425..1969117
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEHT_RS08895 (ACJEHT_08895) | - | 1962354..1963424 (-) | 1071 | WP_011214414.1 | hypothetical protein | - |
| ACJEHT_RS08900 (ACJEHT_08900) | rocC | 1963425..1964117 (-) | 693 | WP_011214413.1 | ProQ/FINO family protein | Regulator |
| ACJEHT_RS08905 (ACJEHT_08905) | - | 1964474..1964659 (+) | 186 | WP_027266210.1 | hypothetical protein | - |
| ACJEHT_RS08910 (ACJEHT_08910) | dapB | 1964844..1965575 (+) | 732 | WP_011214411.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| ACJEHT_RS08915 (ACJEHT_08915) | - | 1965678..1968146 (-) | 2469 | WP_011214410.1 | hypothetical protein | - |
| ACJEHT_RS08920 (ACJEHT_08920) | - | 1968324..1968500 (+) | 177 | WP_011214409.1 | dodecin domain-containing protein | - |
Sequence
Protein
Download Length: 230 a.a. Molecular weight: 25765.67 Da Isoelectric Point: 10.7292
>NTDB_id=1076436 ACJEHT_RS08900 WP_011214413.1 1963425..1964117(-) (rocC) [Legionella pneumophila strain SPF582]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKTREVRIDLLGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQSSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETAE
Nucleotide
Download Length: 693 bp
>NTDB_id=1076436 ACJEHT_RS08900 WP_011214413.1 1963425..1964117(-) (rocC) [Legionella pneumophila strain SPF582]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGCCCATTAAAGATTGGTATTA
TGTCCGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAACTCGTGAAGTCCGTATCGATTTGCTCGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGTCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCCGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAGCAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
95.652 |
100 |
0.957 |